Detail



ID : Ahg319178

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|319178|fgenesh1_pm.C_scaffold_3002194
Sequence
ATGCCAATGA GGAGCAAAAC CCCAACGCCT CTCCGCTTCT CAAATGGAAA GCATCAAAAA GCTGATTCTG ACTATAGTTG GAGTGATGTA GGTACTGGGG AGAAGGCGAG GAATGTCTCC GTCCTCTGTG CCATCAGAAG GGCAGCTAAG AAAGTCTTTG CTATTATTTT CTTAGGACAA CGAAAGTTCA AGCCAACAGA ATGTAGATCT GATCCTGGAG AGAGCAGCAC GCTTGACAGA GATTCTACAT TATCAGGCTG GACTGGCTAT TCATCACCAA GCTCTTTTGG AAGGTCAACA GAAAGAAAGA TTTCAGGTCA ATATCGTTTT TCTGGTTCAA GATTTCAAAG TCCTGGGAAA GATTCTTCTT CTAGCAAAAG TTGGCACCAA GGCCCGGTAA TATTTTCTTT TGTGGAGCTT CAAAGGGCAA CTGCAAATTT TTCATCGGTT CATCAAATTG GGGAAGGCGG TTTTGGAACT GTTTTTAAGG GAAAGCTTGA TGATGGAACT ATTGTTGCTA TCAAGCGAGC CAGAAAGAAC AACTATGACA AAAGCTGGTT GCTAGAGTTT AAGAATGAAA TATACACATT GTCAAAGATT GAGCATATGA ATTTGGTAAA GCTATATGGA TTTCTTGAAC ATGGAGATGA AAAGGTTATT GTTGTTGAAT ATGTTGGCAA TGGAAACCTA CGAGAACATC TAGATGGTTT ACGGGGTAAC CGCCTTGAAA TGGCAGAACG TCTTGAGATT GCGATTGATG TAGCTCATGC ATTGACCTAT TTGCACACAT ATACGGATAC TCCAATAATA CACAGAGACA TTAAAGCCTC AAATATCCTC ATTACGAATA AGCTTAGAGC CAAAGTGGCA GACTTTGGCT TTGCTCGTTT AGTTTCGGAA GATCTCGGGG CTACTCATAT ATCGACTCAG GTCAAAGGAT CTGCAGGTTA TGTGGATCCA GATTACCTCA GGACGTTTCA ACTAACCGAC AAGAGTGACG TTTACTCTTT TGGTGTTTTG CTCATAGAGC TTCTCACTGG AAGACGTCCC ATTGAGTTAA AGAGACCACG AAAAGACCGA CTTACTGTTA AATGGGCATT GAGGAGACTC AAAGACGATG AAGCTGTTCT CATAATGGAT CCATTTCTCA AGAGAAACCG AGCCGCCATT GAAGTGGCTG AGAAAATGCT GAGACTGGCG AGCGAATGTC TTGCCCCGAC GAGAGCTACA CGTCCAGCTA TGAAAGACAT TGCGGAAAAG CTATGGGCTA TAAGGAGAGA GATGAAGGAG ACGATGATAT GTTCCTCTGC CTCTAATTCT TCCTGTTCTT CAACAACACA TAGCTTCATT GGTCGTGATT CAGACAGATT TGCGTTGCCG AGGATCGAAG ACAACGAGAA TAGCATTGAG TTACTCTCTC CTTGA 
Length1425
Protein Sequence
Protein Residue
Map Locationscaffold_3: 11408726.. 11410774
Download Sequence
A.thaliana
AGI-codeAT5G58940.1
Descriptioncalmodulin-binding receptor-like cytoplasmic kinase 1
TAIR curator summaryArabidopsis thaliana calmodulin-binding receptor-like kinase mRNA
Alias[CRCK1][calmodulin-binding receptor-like cytoplasmic kinase 1]
Gene coexpression
MR
MR Locus Description
4 Ahg917508 cyclic nucleotide gated channel 5
10.3923 Ahg905716
16.2481 Virus1678
21.4476 Virus0515
22.7156 Ahg326968 Major facilitator superfamily protein
24.7386 Virus2153
25.0799 Ahg942567
26.8328 Virus1794
29.3258 Ahg932731
32.8786 Ahg948876
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression