Detail



ID : Ahg320998

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|320998|fgenesh1_pm.C_scaffold_4001055
Sequence
ATGGCGGATT CAAGCTCTTC TCTCCCTCCT CTTTGCGAAA GGATCTCGTA CGCCAACTAT TTTCTAAGAG CTGTGTATCT AACGATTCTC GGCCTTTTCT TTTCTCTTCT CTCGCACCGA ATCCGACATA TGAGCGAATA CGACACCGTT TGGCGCGTTG CTTTCTTTTG TGAAACTTGT TTCTCATTGG TATGTCTGCT TATTACCTGC CTAAAATGGA GTCCTGCTGA TACTAAACCC TTTCCAGATA GACTTGATGA AAGGGTTCAT GACCTTCCTT CCGTGGATAT GTTTGTGCCC ACGGCGGATC CTGTTCGAGA GCCACCGATT ATGGTTGTGG ACACCGTGCT TTCGCTGTTA GCTGTAAATT ATCCAGCGAA TAGACTAGCT TGCTATGTGT CGGACGATGG TTGCTCACCT CTTACTTACT TCTCTCTCAA GGAAGCTTCT AAGTTCGCTA AGATTTGGGT ACCTTTCTGC AAGAAGTACA ACATCAGAGT TAGAGCTCCT TTTAGATATT TTTTGAACCC GATAAGCGAC GTAACAGAGG GTTCTGAATT CAGTAAAGAC TGGGAAACGA CGAAGAGGGA GTACCAGAAG TTGAGCCGGA AAGTGGAAGA TGCCACCGGA GATTCCCATT TGTTGGATGT AGAAGATGAT TTTGAAGCAT TCTTAAACAC AAAACCAAAT GATCATTCAA CTATAGTTAA GGTGGTATGG GAGAACAAGG GAGGTGTAGG AGACGAGAAA GAGGTCCCTC ATATTGTATA CATTTCAAGA GAGAAAAGAC CAAATTATCT TCATCATCAA AAATGTGGAG CCATGAACTT TCTGGCAAGA GTGTCAGGGT TGATGACAAA CGCACCATAT ATCTTGAACG TGGACTGCGA CATGTATGCC AATGATGCAG ATGTGGTGCG ACAAGCAATA TGTATATTTC TGGAAAAATC ACTGAATCCA AAACATTGTG CTTTTGTTCA ATTCCTTCAA GAGTTCTATG ATTCTAACAC CAGCCAAATC GTCGTCCTAC AATCATATTT GGGACGAGGA ATTGCGGGAA TCCAAGGACC GATATATATA GGCTCAGGAT GCGTCCACAC TAGAAGAGTT ATGTACGGTT TATCTCCAGA CGATTTAGAA GGCGATGGAA GTCTTTCTTT AGTTGCTACA AGGGAGTTTT TGGTTGAGGA TAGTTTAGCG AGAAGATTTG GTAATTCTAA AGAGATGGTG AAATCAGTGG TTGGTGCAAT ACAAAGAAAT CCAAATCCAC AAAATATACT TACAAACTCC ATAGAAGCGG CTCAAGAAGT TGGGCATTGT CACTACGAGT ACCAAACCAG CTGGGGAAAC ACTATCGGTT GGTTATATGA TTCAGTGGCG GAAGATTTGA ACACGAGTAT CGGAATACAT TCGAGAGGTT GGACTAGCTC ATACATTTCT CCGGATACAC CTGCATTTCT TGGATCTATG CCGCAAGGAG TACCCGAGGC GTTGCTCCAG CAACGTCGAT GGGCGACTGG ATGGATCGAA ATCCTTTTCA ACAAACAAAG TCCGTTGCGG GGAATGTTTT GCAAGAAAAT AAGATTCCGA CAGCGATTAG CTTATCTTTG CATTATCACT TCTCTAAGGT CAATCCCTGA GCTTATTTAT TGTCTACTTC CTGCTTATTG CCTACTCCAC AACTCTGCCT TGTTTCCCAA GGGAACTTAT CTAGGCATAA CAATCACACT TGTTGGGATG CATTGTCTCT ATACTCTATG GGAATTTGTG AACCTTGGTT ATTCCGTACA ATCGTGGCTA GTCTCCCAAT CAGTTTGGAG AATAGTAGCC ACTAGTAGTT GGTTATTTAG CATCTTTGAT ATCACTCTTA AGCTTCTTGG CATCTCGGAA ACAGTGTTCA TAATCACTAA AAAGACTGTG CCTGCTGGAC CATCTGAAGG AGAAGACGAT GGTCCAAACT CAGACTCAAG TAAATTTGAA TTTGATGGCT CACTTCATTT CTTGCCTGGC ACATTTATTG TGTTGGTGAA TCTAGCCGCT CTAGCTGTTT TTACTGTGGG TCTACAACGG TCGAGTTACA GCCACGGAAG AGGTAGTTCG GGTATGGCAG AGGCTTGTGT ATGTGTTTTG GTAATGATGT TGTTCTTTCC ATTTCTAAAG GGTTTGTTTG AAAAAGGAAA ATATGGAATC CCATTGTCTA CTCTCTCTAA AGCTGGCTTT TTAGCAGTTT TATTTGTTGT TTTCTCTGTT TAA 
Length2253
Protein Sequence
Protein Residue
Map Locationscaffold_4: 14639683.. 14643023
Download Sequence
A.thaliana
AGI-codeAT2G32610.1
Descriptioncellulose synthase-like B1
TAIR curator summaryencodes a gene similar to cellulose synthase
Alias[ATCSLB01][ATCSLB1][CSLB01][CSLB01][cellulose synthase-like B1][CELLULOSE SYNTHASE LIKE B1]
Gene coexpression
MR
MR Locus Description
45.7165 Ahg904884 RNA-binding protein
64.7457 Ahg947612
72.9383 Ahg945347 COBRA-like protein 11 precursor
72.952 Ahg471935 MADS-box transcription factor family protein
88.0909 Ahg487573 Pectin lyase-like superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression