Detail


ID : Ahg321761

Blast(Query):  A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|321761|fgenesh1_pm.C_scaffold_4001818
Sequence
ATGGATTCAA ATAGTAACAA CACCAAATCC ATAAAGAGAA AAGTTGTCGA CCAACTTGTC GAAGGCTATG AATTCGCTAC TCAGCTTCAG CTTCTCCTCT CTCATCAACA CTCTAAACAG TACCACATCG ATCAGACCCG TCTTGTTTCC GGGTCGGGTT CAGTTTCCGG TGTTCCAGAT CCCGTTGATG AGCTCATGTC TAAGATCTTG GGATCTTTCC ATAAAACTAT TTCCGTTCTT GATTCTTTTG ATCCCGTCAC CGTCTCTGTC CCCATCTCCG TCGAGGGTTC ATGGAATGCT TCATGTGGAG ATGATTCGGC GACTCCGGCG AGTTGCAACG GTGGAGATTC CGGTGATAGT AAGAAGAAGA GATTAGGAGT TGGTAAGGGT AAAAGAGGAT GCTACACTAG AAAGAAGAGA TCACATACAA GGATCGTGGA AGCTAGAAGT TCTGAAGATA GATATGCTTG GAGGAAATAT GGACAAAAGG AGATTCTTAA TACCACATTC CCAAGAAGTT ATTTTAGATG CACACACAAG CCAACGCAAG GATGCAAAGC AACAAAGCAA GTACAGAAAA AGGAGCAAGA CCCTGAGATG TTCCAAATCA CATACATTGG CTATCACACA TGCACTGCCA CTGACCAAAC ACACACGAAG ACCGAGCCTT TCGATCAAGA AATCATTATG GATTTGGAAA AGACATTGGC TGCAAGCACT GTTCAGAACC ATGTCAATGC TATGGTGCAA GAGCAAGAGA ACAACATCAG TAGTGTGATA GCTGTAGGCG CAGGCATGGT TAAGGAGGAA GAGAATAACA ATGGTGATCA GAGTAAAGAT TATTGTGAGG TCTCTTCGAC AGGTGAGGAC TTGTCATTGG TTTGGCAAGA GACGATGATG TTTGATGATC ATCAAAATAA CTACTATTGT GGTGAAATCA GTACTACTTC TCATCAATTT GGTTTCATCG ACAACGATCA GCTTTCCTCC TTATTCGACT CATATTGTGC CTGA
Length1014
Protein Sequence
Protein Residue
Map Locationscaffold_4: 17175600.. 17177332
Download Sequence
A.thaliana
AGI-codeAT2G40750.1
DescriptionWRKY DNA-binding protein 54
TAIR curator summarymember of WRKY Transcription Factor; Group III
Alias[ATWRKY54][WRKY54][WRKY DNA-BINDING PROTEIN 54][WRKY DNA-binding protein 54]
Gene coexpression
MR
MR Locus Description
1.41421 Ahg486111 sigma factor binding protein 1
1.41421 Ahg486080 WRKY DNA-binding protein 70
1.73205 Ahg470205 NIM1-interacting 1
2.23607 Ahg936277 NIM1-interacting 2
5.65685 Ahg473540 Protein of unknown function (DUF567)
10.4881 Ahg478899 Leucine-rich repeat transmembrane protein kinase
12.3693 Ahg328547 WRKY family transcription factor
13.8564 Ahg324601
14.4914 Ahg472363 wall-associated kinase 2
16.0624 Ahg470561 beta-hexosaminidase 2
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression