Detail



ID : Ahg323209

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|323209|fgenesh1_pm.C_scaffold_5000753
Sequence
ATGTCTGTAA AACTAATCTT ATCTTCATCA ATCCTTCTGA TTTTCTTCGC GGCGGCTGCG ACTAAAGAGA TCGGGTTCGA TGAATCAAAT CCAATCAAAA TGGTCTCCGA CAATCTCCAC GAGCTTGAAG ACACCGTCGT TCAGATCCTA GGCCAGTCCC GTCATGTTCT CTCCTTTTCT CGCTTCGCTC ACCGGTATGG GAAGAAGTAT CAGAGCGTGG AAGAGATGAA GTTACGATTC TCTGTTTTTA AAGAGAATCT TGATTTAATC AGATCCACTA ATAAGAAAGA TTTATCTTAT AAACTCTCTC TTAATCAGTT TGCTGATTTG ACATGGCATG AGTTTCAAAG ATATAAGCTT CTTCTTCTTC TTCTCCTTGT AAACACGACG GGAGCTCTTG AAGCAGCTTA CCATCAAGCA TTTGGAAAAG GAATATCTTT GTCTGAGCAA CAGCTTGTTG ATTGTGCTGG AACTTTTAAT AACTTTGGTT GTCATGGCGG ACTTCCTTCT CAAGCCTTTG AATACATTAA ATATAACGGT GGGCTCGATA CAGAGGAGGC TTATCCTTAC ACGGGAAAAG ACGGTGGCTG CAAATTTTCA GCGAAAAACA TCGGTGTACA AGTCCTTGAC TCTGTTAACA TTACCCTGGG TGCAGAAGAT GAACTGAAGC ATGCGGTCGG GTTGGTAAGG CCAGTGAGTG TGGCGTTTGA GGTTGTACAT GAATTTCGGT TTTACAAGAA GGGAGTTTTT ACTAGTAATA CTTGTGGAAA CACTCCAATG GATGTAAACC ATGCAGTGTT AGCAGTTGGT TATGGAGTTG AAGACGACGT CCCGTATTGG CTTATAAAGA ACTCATGGGG AGGTGATTGG GGAGACAATG GCTATTTCAA GATGGAAATG GGAAAGAACA TGTGTGGTGT TGCAACATGT TCATCGTATC CGGTTGTGGC CTGA 
Length954
Protein Sequence
Protein Residue
Map Locationscaffold_5: 11366888.. 11368408
Download Sequence
A.thaliana
AGI-codeAT3G45310.1
DescriptionCysteine proteinases superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
12.49 Ahg909813 ferric reduction oxidase 1
13.4164 Ahg928001 threonine aldolase 2
15.748 Ahg900074 Protein of Unknown Function (DUF239)
19.4936 Ahg474412 NAC (No Apical Meristem) domain transcriptional regulator superfamily protein
20.567 Ahg907518 glutathione S-transferase TAU 16
27.3861 Ahg889845 cysteine-rich RLK (RECEPTOR-like protein kinase) 16
28.5657 Ahg488062 pyrimidine 2
30.9839 Ahg481806 CAX interacting protein 4
31.4643 Ahg934191 Phosphotyrosine protein phosphatases superfamily protein
35.6931 Ahg476684 bifunctional nuclease in basal defense response 1
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression