Detail



ID : Ahg324269

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|324269|fgenesh1_pm.C_scaffold_5001813
Sequence
ATGGAAAAAA TTGTAACCCT AAATCATGAC CTACCTCTGT TACACTTGCC GAATTCTCGG AAACCCTTTT CGATTCCATC TCCGATTCTT CGATTTTCAA GCTTCAATCT TCGTAAGAAA CGTCTTTGTC TTGCATCGTC TTCCGAAACA GAGACCAAGA CTGTGACTGT TTCGGAGAGC CATGGTGTGA TAGTTGACAA CAGTACCGTT GGAAGAAGTT TGCTTGGTTT AGCCGCCGCC GTTGCAGTAG CTGTTTCTTC GTCGATCTTT TGCGATTCTT CGGCACTAGC TGAGTCTCTG ACGATCGCTT TCCCTGTTTC ACGTGCTCGT GAGGTTACTA CAGTACAGAG AACTCTTGTG GAAGCTTGGG GTTTAATTAG TGAAACATTC GTTGATCCAA CTTTTAATCA TCAGGATTGG GATTTTAAGT TGCAGCAGAC AATGGTGGAA ATGCTTCCTC TAAGATCAGC AGATGCTGCT TATGGAAAGC TCAAAGCTAT GCTCTCTACG CTTGGTGATC CCTTTACTCG ACTCATTAGC CCTAAGGAGT ACCAAAGTTT CAGAATTGGC AGCGATGGAA ATCTCCAAGG TGTTGGCCTT TTCATAAACT CAGAACCAAG AACAGGTCAC CTGGTTGTTA TGTCTTGCAT AGAAGGTAGC CCGGCAGCTC GTGCTGGTAT ACATGAAGGC GAGGAATTAG TCGAGATAAA TGGTGAGAAA TTGGATGGTG TTGATAGTGA AGCAGCAGCA CAGAAGCTGA GAGGCCGAGT TGGAACATTT GTTACCATAA AACTTAAAAG TGTGAATGGA TCAAGGACAG ATTCTGGTAT CAGAGAGGTC AAGTTACCTC GAGATTACAT TAAGTTATCT CCAATATCCA GTGCTATAAT CCCACATACA ACACCTGATG GACGTTTAGC AAAGACGGGT TATGTCAAAC TCACAGCTTT TTCTCAGACT GCAGCGTCCG ATATGGAAAA TGCGGTACAC GAGATGGAGA ATCAGGATGT TCAGTCATAT ATTCTAGATC TAAGGAACAA TCCGGGAGGT CTGGTTAAAG CTGGCCTTGA TGTTGCACAA CTATGGCTTG ACGGAGATGA GACTCTTGTG TATACAATCG ATCGAGAAGG GGTTACATCA CCGATAAACA TGATTAATGG ACACGCTGTG ACACACGATC CACTTGTTGT GCTTGTGAAT GAAGGAAGTG CGAGTGCAAG TGAAATTTTG GCAGGTGCTT TACATGATAA TGGTCGGGCT ATACTTGTCG GTAACCGGAC ATTTGGGAAA GGGAAAATCC AGAGTGTAAC GGAACTAAAC GATGGGTCGG CTTTGTTTGT GACGGTGGCT AAGTATTTGT CTCCGTCTCT ACACGAAATT GATCAAGTAG GGATTGCACC TGATGTACAG TGTACCACGG ATATGATCGA TTCTTTGACC GGTGAGACAC TTAAGAAGAT GAACAGTTCG GTTCCATTGC TTGATACAGA CTCATGTGTT GTGGTCGCTG AGCACGAACT TGAGACTCTA CGATCCAATG GAACAGCTTC TTGA 
Length1554
Protein Sequence
Protein Residue
Map Locationscaffold_5: 17525429.. 17528029
Download Sequence
A.thaliana
AGI-codeAT3G57680.1
DescriptionPeptidase S41 family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
9.64365 Ahg496886 F-box/RNI-like superfamily protein
16.1245 Ahg934940 phosphatidylinositol- 4-phosphate 5-kinase 5
19.1572 Ahg919779 branched-chain amino acid transaminase 2
19.975 Ahg493967 nodulin MtN21 /EamA-like transporter family protein
21.8632 Ahg484673 NAC domain containing protein 3
25.7099 Ahg489607 Protein of unknown function, transmembrane-40
27.1293 Ahg347271 Domain of unknown function (DUF298)
30.4959 Ahg321591 endoplasmic reticulum oxidoreductins 2
30.7246 Ahg488515 glutamine synthetase 1;4
34.4964 Ahg314946
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression