Detail


ID : Ahg325328

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|325328|fgenesh1_pm.C_scaffold_6000548
Sequence
ATGGAGCAAA TACGGTCCTT CTTTGTGTTC TTGGCTGTTT TGTTAGCTTC ACTTGTCAAT GCAGAAGTTC ACTTTCATGA GTTTGTTGTT CAAGAGACGC CGGTGAAGAG GCTGTGCAGA GTTCATAACT CGATCACGGT GAATGGACAG TTTCCAGGGC CGACCTTGGA GGTGCGAAAC GGTGATTCCC TTGTCATCAC AGCCATAAAC AAAGCTCGGT ACAACATCAC CCTCCACTGG CATGGGATAC GGCAGATGAG GAATCCATGG GCGGATGGAC CAGAATACAT AACCCAGTGC CCAATCCAAC CAGGAGGGAG TTACACGTAC AGGTTCACCA TTGAAGACCA AGAAGGTACG TTGTGGTGGC ATGCCCACAG TAGATGGCTG CGAGCCACCG TGTATGGCGC TCTCATTATC CGCCCTCCGC TCTCTTCTCC TCATTACCCT TTTCCAGTTA TTCCCAAGAG AGAGATTACC CTCCTCTTAG GGGAGTGGTG GGACAGAAAC CCCATGGATG TCCTCAACTT AGCCCAGTTC ACCGGAGCAG CACCAAACAT CTCAGACGCC TTCACCATCA ATGGTCAGCC TGGCGATCTC TACAGATGTT CTAGCCAAGA AACTTTAAGA TTTCTAGTGG GGTCAGGAGA GATTGTCCTC CTCAGGGTCA TCAATTCTGC TTTGAACCAA GAACTCTTCT TTGGTGTCGC TAATCACAAA CTGACAGTGG TCGCTGCGGA TGCCTCCTAC ACCAAACCTT TCTCGACTAA TGTCATAATG TTAGGTCCAG GTCAGACAAC TGATGTGCTT CTAACCGCAG ACCAACCGCC AGCACATTAC TACATGGCAG CACATGCCTA CAACAGTGCC AACGCTGCCT TTGACAACAC CACAACCACT GCAATCCTCA AGTACAAAGA TGCCTCCTGT GTTACTCTTC AAGGTAAATC ACAGGCACAG GCAATACCTG CACAGCTGCC AGGATTCAAC GACACAGCAA CAGCAGCAGC ATTCACAGCG CAGATGAAGA GTCCTTCGAA AGTAAAAGTG CCCCTGGAGA TTGATGAGAA CTTGTTTTTC ACAGTGGGAT TGGGACTATT CAACTGCCCA ACCCCCAACA CACAAAGGTG TCAAGGCCCT AACGGAACAC GCTTCACCGC GAGCATCAAC AATGTCTCTT TCGTCTTCCC CAAACAAAAC TCCATAATGC AAGCGTATTA CCAAGGCACT CCCGCAGGTG TTTTCACCAC AGACTTCCCT CCAACGCCTC CTGTCACATT TGACTATACA GGAAACGTGA GCAGAGGGCT ATGGCAACCT ACCCGCGGAA CAAAGGCCTA CAAACTAAAG TTCAATTCAA AAGTGCAGAT TATATTGCAA GACACGAGCA TCGTGACCAC TGAGAATCAC CCTATGCATC TCCACGGCTA CGAGTTCTAC GTAGTTGGGA CAGGTGTTGG TAACTTCAAC CCAAATACAG ACACAGCTTC CTTTAACCTC ATCGACCCAC CACGAAGAAA CACAATCGGA ACACCACCAG GCGGATGGGT AGCCATCAGA TTCGTGGCGA ATAATCCAGG AGCGTGGCTG ATGCACTGCC ACATCGACTC ACATATATTC TGGGGTTTAG CAATGGTCTT CTTAGTGGAG AACGGAGAAG GGCATTTGCA ATCTGTACAG TCTCCACCAT TGGACTTACC CCAATGTTAA
Length1710
Protein Sequence
Protein Residue
Map Locationscaffold_6: 2611458.. 2613431
Download Sequence
A.thaliana
AGI-codeAT5G07130.1
Descriptionlaccase 13
TAIR curator summaryputative laccase, a member of laccase family of genes (17 members in Arabidopsis).
Alias[LAC13][laccase 13]
Gene coexpression
MR
MR Locus Description
6.7082 Ahg487770 hydroxyproline-rich glycoprotein family protein
12.9615 Ahg480719 Peroxidase superfamily protein
14.1421 Ahg490805 hydroxyproline-rich glycoprotein family protein
14.5945 Ahg484008 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
21.6564 Ahg487769 hydroxyproline-rich glycoprotein family protein
22.1359 Ahg322456 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
25.9037 Ahg487764 hydroxyproline-rich glycoprotein family protein
27.2764 Ahg479778 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
36.4417 Ahg493874 HXXXD-type acyl-transferase family protein
37.0405 Ahg481221 GDSL-like Lipase/Acylhydrolase superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression