Detail



ID : Ahg325696

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|325696|fgenesh1_pm.C_scaffold_6000916
Sequence
ATGGATTTCA TGAAGGTCTT CGATCAAACG GTTCGAGAGA TAAAGAGGGA GGTGAATCTG AAAGTTTTGA AGGTCCCTGA GATGGAGCAA AAGGTATTGG ATGCTACAGA TAATGAGCCT TGGGGTCCCC ATGGTACTGC ATTGGCAGAG ATAGCACAGG CCACGAAGAA ATTCTCGGAG TGCCAGATGG TTATGAGTGT TTTGTGGACT AGACTAAGTG AGACAGGAAA AGATTGGCGA TATGTCTACA AGGCATTGGC TGTTATCGAT TATCTGATTT CAAATGGATC AGAACGAGCG GTTGATGAGA TTATTGAGCA TACGTACCAA ATATCTTCAC TCACGAGTTT TGAGTATGTT GAACCAAATG GAAAGGATGT GGGAGTCAAC GTGAGAAAGA AGGCGGAAAA CATAGTCGCT CTCTTGAATA ATAAAGAGAA AATCTCAGAA ATCAGAGACA AAGCAGTAGC AAATCGTAAC AAGTATGTTG GCCTCTCATC AACGGGAATA ACATATAAAT CTGGTTCCTC AGCTTCATTT GGTGGTAGTT TTCAAAGTGG TTCAAGCAAT CATGACAGCT ACAAGGATAA GGATTCCAGA GAAGAGAAGA ATGACTACGA GTCTTTTCAA AAGTCAAGAC GTGGTGTTAA AAGCGAGGAG CAAAGCTACA CTTCTAAGAA GAGTTTTTCA CGTTATGGCA GCACGGACCA TGACAATCTA TCCAGTGGAA AAAAGTCACC CGATTCTGCC AAACATAGTT CATATGTATC TGCAGCTCCT TCAAACAACG ATGATGATTT CGATGATTTT GATCCACGTG GAACTTCCAG CAATAGTATG TTTCTCTCTA CAACTGCTGA GTTTGCAGAT TGTTTATCAT TTATTGGGGA AAAAGTTGCC AGTGCCAAAC AAGTGGACCT TTTTGGAGGG GATCTGATTG GTGACCTCTT GGATTCTGGG CCAACAGAAA CATCTTCCAC CAACAACAAC GAGAATTTTC AAGAGGCGGA CTTGTTTGCT GATGCAGCTT TTGTATCAGC CTCGGCTCAG GGAACTGAAT TTGGGTCACA GACACAGAAA GAGGTTGATC TTTTCTCTGC GTCTGAACCT TCTTTCACAG TTTCTTCAGC TCCTCCGACG GTTGATCTTT TTGCATCTTC TGAATCAGTT GCAAGCCCAG AAGCCAAGAT ATCTAAACCC GAGTCTATGA CAAATCCCAA CATTGTTGAC CCTTTTGCTG CAGTTCCTAT GGATAATTTT GATGGATCTG ATCCTTTTGG TGCCTTCACT TCCCACTCAG CTTCAGTCTC TACAGGTCCA CAAGCTCCAA GTGTACATGG GAGTGCAACA AACACCACAA GCCCGCTGTC TTTGGCAGGC TCGAAGCCAC AACACTTGCA AAAGAAAGAT CCTTTCCAGG TGAAATCTGG AGTTTGGGCA GATTCGCTGA GCCGTGGACT GATTGATCTC AATATAACTG CTCCCAAAAA AGCTTCTCTA GCTGATGTGG GCGTTGTGGG TGATCTGAGC AATGATGAAG GGAACAAAGC ATCTGCTGCA TCGTACTACT CAGGCTGGTC CATGGGTACA GGATCCGGGC TCGGTAAAAC CGGTCTATAC AGTGCACAGC AGCAACAACA ACAACAAGCA CCTGATATCT CAGATGATTT CTTCTCCAGC CTCAGTAACC AAAGGTACCA ATCTGGTGGC TTTAAGCAGT GA 
Length1722
Protein Sequence
Protein Residue
Map Locationscaffold_6: 4570283.. 4573653
Download Sequence
A.thaliana
AGI-codeAT5G11710.1
DescriptionENTH/VHS family protein
TAIR curator summaryEPSIN1 plays an important role in the vacuolar trafficking of soluble proteins at the trans-Golgi network via its interaction with gamma-ADR, VTI11, VSR1, and clathrin. Associated with actin filaments and with the Golgi complex. Expressed in most tissues.
Alias
Gene coexpression
MR
MR Locus Description
2 Ahg926502 ARM repeat superfamily protein
4.69042 Ahg938850 DNAse I-like superfamily protein
9.21954 Ahg471233 transmembrane nine 1
9.48683 Ahg472337
10.9087 Ahg921308 CYTOCHROME C-1
12.49 Ahg479023 Single hybrid motif superfamily protein
13.6382 Ahg478791 Root hair defective 3 GTP-binding protein (RHD3)
13.6382 Ahg939446 transducin family protein / WD-40 repeat family protein
17.3205 Ahg951011 BCL-2-associated athanogene 7
17.8606 Ahg933950 NAD(P)-binding Rossmann-fold superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression