| Annotation |
|---|
| Description | jgi|Araly1|325786|fgenesh1_pm.C_scaffold_6001006 |
| Sequence |
ATGTCTGCTA CGAGAGGAGG TCCTGAACAA GGACCGTCTC AGCCTCAGCA GCGGCGGATC GTACGAACTC AGACTGCTGG TAATCTAGGA GAGTCTTTCG ATAGTGAAGT TGTTCCTTCA TCGCTTGTTG AGATTGCTCC CATTCTTCGT GTTGCTAATG AGGTTGAATC TAGTAACCCT AGGGTTGCTT ATCTCTGTCG GTTTTATGCA TTTGAGAAAG CTCATAGATT GGATCCTACC TCCAGTGGAA GAGGTGTTCG GCAGTTTAAG ACTGCACTTC TACAGCGTCT TGAACGAGAA CATGATCCAA CACTGATGGG CAGGGTTAAG AAAAGTGATG CCCGTGAAAT GCAAAGCTTT TATCAACATT ACTATAAGAA GTATATTCAA GCTTTGCACA ATGCTGCAGA TAAGGCTGAC CGTGCCCAGC TGACAAAGGC ATACCAAACT GCCAATGTTT TGTTTGAGGT GTTGAAGGCT GTTAATCTCA CACAGTCCAT TGAGGTTGAC CGGGAGATTC TGGAAGCTCA AGATAAGGTT GCAGAAAAGA CACAGTTGTA TGTCCCCTAT AATATCCTAC CTCTCGATCC TGATAGTGCA AATCAAGCGA TTATGAGATA TCCTGAGATC CAAGCTGCTG TTCTTGCTCT CCGCAATACT AGAGGTCTTC CTTGGCCAGA AGGTCACAAG AAAAAGAAAG ATGAGGACAT GCTTGATTGG CTTCAAGAAA TGTTTGGATT TCAGAAAGAC AATGTGGCTA ATCAAAGGGA GCATCTGATC TTATTACTTG CTAATGTGCA TATAAGACAA TTTCCTAAGC CTGATCAGCA GCCAAAGTTA GATGATCAAG CATTGACAGA AGTGATGAAG AAGCTTTTCA AGAACTATAA GAAGTGGTGC AAATACCTTG GTCGAAAGAG TAGTCTGTGG TTGCCAACTA TACAGCAAGA AATGCAACAG CGCAAACTAT TGTATATGGC CCTGTATCTT CTAATTTGGG GTGAAACAGC GAACTTGAGA TTCATGCCTG AGTGTCTCTG CTACATTTAT CATCATATGG CATTTGAACT CTATGGTATG CTGGCTGGGA ATGTTAGTCC TATGACTGGG GAAAATGTGA AGCCAGCTTA TGGAGGCGAG GAAGATGCAT TCTTGAGGAA AGTTGTGACT CCTATTTATG AAGTGATTCA GATGGAGGCT CAAAGAAGCA AAAAAGGGAA GTCTAAGCAC TCTCAGTGGA GGAACTACGA TGATTTGAAT GAATACTTTT GGTCAGTTGA TTGTTTTCGA TTAGGTTGGC CAATGCGAGC TGATGCTGAT TTCTTTTGTC TGCCTGTTGC TGTACCTAAT ACAGAAAAGG ACGGGGATAA CAGCAAGCCT ACTGTCGCCA GGGATAGATG GGTTGGAAAA GTTAATTTTG TTGAGATTCG TTCCTTCTGG CATGTCTTCA GAAGTTTCGA TCGAATGTGG AGCTTCTATA TTCTGTGCCT TCAGGCCATG ATTATTATGG CCTGGGATGG CGGACAACCA AGTTCAGTCT TTGGAGCTGA TGTATTCAAG AAAGTTCTGA GCGTGTTTAT CACAGCTGCA ATAATGAAGC TTGGACAAGC TGTTCTTGAT GTGATCCTTA ATTTCAAAGC TCATCAAAGC ATGACACTAC ATGTTAAACT AAGATACATT CTGAAAGTGT TATCGGCTGC TGCCTGGGTT ATTATTCTGC CTGTTACTTA CGCCTACAGC TGGAAAGATC CTCCAGCATT TGCCAGAACT ATCAAGAGTT GGTTTGGGAA TGCCATGCAC TCACCTTCAC TATTTATAAT AGCTGTCGTT TTCTATTTGT CGCCTAACAT GCTCGCGGAA ACTAATGAAA AACACCCGAT GTGTTTTTTT GCTGATGCGA CCATAATTAG TTATATTTTT TACACCTTGC AGCCCAGACT CTATGTTGGT AGAGGAATGC ACGAGAGCGC ATTTTCCCTC TTCAAATATA CCATGTTTTG GGTGTTGCTT ATTGCAACAA AGCTGGCCTT CAGTTACTAC ATTGAGATCA AGCCTTTAGT TGCCCCAACA CAAGCCATTA TGAAGGCCCG TGTGACAAAT TTTCAGTGGC ATGAGTTCTT TCCTCGTGCC AAAAACAATA TTGGTGTTGT TATCGCCCTC TGGGCCCCCA TTATTCTGGT ATATTTTATG GATAGTCAGA TTTGGTATGC TATATTTTCC ACATTATTTG GAGGTATTTA TGGTGCATTC CGCCGCCTTG GAGAGATTCG TACACTGGGA ATGCTTAGAT CACGGTTTGA ATCACTGCCT GGAGCTTTTA ATGACCGCTT AATTCCAGAT GGAAAGAACC AGCAAAAGAA GAAGGGAATA AGGGCAACTT TATCTCATAA CTTTACAGAG GATAAGGTAC CTGTGAACAA AGAGAAAGAG GCTGCAAGAT TTGCACAGTT GTGGAACACA ATAATCAGTA GTTTTAGAGA GGAAGATCTT ATAAGTGATA GGGAGATGGA TCTGTTGCTT GTTCCATATT GGGCTGACCG TGATTTGGAT CTCATACAGT GGCCTCCCTT CTTATTGGCT AGCAAGATTC CAATAGCATT AGACATGGCA AAAGACAGTA ATGGGAAAGA CAGAGAGCTC AAGAAGAGGA TTGAGAGTGA CACTTACATG AAATGTGCTG TCCGTGAATG CTATGCTTCA TTCAAGAATA TCATAAAATT TGTGGTTCAG GGAAACCGTG AAAAAGAGGT GATAGAGATC ATATTTGCCG AGGTGGACAA ACATATAGAT ACAGGGGATT TGATTCAAGA ATACAAGATG AGTGCTCTTC CTAGCCTCTA TGATCACTTT GTCAAGTTGA TCAAATATTT GGTAAATGTT CTTCTTGTGC TAGACAATAA GGAGGAAGAT AGAGATCACG TTGTAATTCT CTTCCAAGAC ATGCTGGAAG TTGTAACAAG AGACATTATG ATGGAGGATT ACAATATATC AAGCTTGGCA ACTTTCTACC GCAATCTTGG TGCCATTAGA TTTCCTATTG AACCAGTAAC AGAAGCTTGG AAAGAGAAGA TCAAACGGAT ATATCTTTTG TTGACTACTA AAGAGTCTGC TATGGATGTC CCCTCTAACT TGGAAGCAAG AAGGCGGATC TCTTTCTTCT CAAATTCGTT GTTCATGGAC ATGCCTATGG CACCTAAAGT TCGCAACATG CTATCGTTTT CTGTTTTGAC TCCATATTAC ACTGAAGAGG TCCTCTTCTC CTTGAGGGAT CTGGAAACAC CAAATGAAGA TGGTGTTTCG ATCCTCTTTT ACTTACAAAA GATTTTTCCA GATGAATGGA ACAATTTTCT TGAGCGGGTG AAGTGCTTAA GCGAAGAGGA ACTTAAGGAG TCTGATGAAT TAGAGGAGGA ACTTCGTTTA TGGGCTTCAT ATAGAGGGCA AACTTTGACT AGAACTGTAA GAGGAATGAT GTACTATCGA AAAGCATTGG AGCTTCAGGC ATTCCTTGAC ATGGCTATGC ATGAAGATTT GATGGAAGGT TACAAGGCTG TAGAACTAAA TTCAGAGAAC AATTCAAGAG GTGAAAGATC ACTCTGGGCA CAGTGCCAAG CCGTTGCTGA CATGAAGTTT ACATATGTTG TATCATGTCA ACAATATGGT ATCCATAAAC GATCCGGTGA TCCTCGTGCG CAGGATATAT TGAGGCTTAT GACAAGATAC CCTTCGCTCC GTGTTGCATA TATTGATGAG GTCGAAGAAC CAGTGAAAGA CAAGTCAAAG AAAGGGAACC AGAAAGTGTA TTATTCTGTG TTGGTAAAGG TGCCTAAGTC AACTGATCAT TCTAGCTTAG CACAAAATCT GGACCAGGTT ATCTATAGGA TTAGGCTTCC TGGACCTGCT ATTCTTGGAG AAGGAAAGCC AGAAAACCAA AATCATGCTA TCATCTTTTC TCGTGGAGAA GGTTTACAGA CAATCGATAT GAATCAGGAT AATTACATGG AAGAAGCGTT AAAGATGAGG AATTTGCTTC AAGAATTTCT TACAAAGCAT GATGGTGTTA GGCATCCATC CATTCTTGGA CTTAGGGAAC ATATATTTAC TGGATCTGTT TCCTCCCTTG CTTGGTTCAT GTCAAATCAA GAGACTAGTT TTGTTACCAT TGGTCAGAGA TTATTGGCAA ACCCATTGAG GGTTCGTTTC CATTATGGTC ATCCAGATGT GTTTGATAGA CTGTTTCATC TAACAAGAGG TGGTGTTAGC AAAGCATCCA AGGTAATCAA CCTCAGTGAA GATATATTTG CAGGATTCAA TTCTACACTT CGTGAAGGAA ATGTTACCCA TCATGAATAC ATACAAGTTG GTAAAGGAAG AGATGTCGGT CTAAATCAGA TATCTATGTT TGAGGCCAAG ATTGCTAACG GCAATGGAGA GCAGACATTA AGTCGGGATA TTTACAGGCT TGGACACCGT TTTGACTTTT TCCGAATGAT GTCATGTTAC TTCACCACTG TTGGCTTTTA CTTCAGCACC TTGATAACTG TTCTCACTGT CTATATCTTC CTTTATGGAC GTCTCTATCT TGTTTTGAGT GGCCTCGAAC AAGGTTTAAG TACACAGAAA GGCATCCGAG ACAATACACC TTTGCAAATA GCTCTGGCTT CACAGTCTTT TGTCCAGATT GGTTTCCTGA TGGCTTTACC TATGCTTATG GAAATTGGAT TAGAGAGGGG TTTTAGGACT GCCTTGAGTG AATTTGTGCT GATGCAGCTT CAGTTGGCGC CAGTGTTCTT TACGTTCTCT CTTGGGACAA AGACTCACTA CTATGGGAGG ACGTTACTTC ATGGCGGTGC CAAGTACAGG TCCACAGGAA GAGGATTTGT CGTCTTTCAT GCCAAATTTG CTGATAATTA CAGACTGTAT TCCCGGAGCC ATTTTGTAAA GGGGCTTGAG ATGATGCTGC TACTCGTTGT GTATCAAATT TTCGGAAGTG CTTACAGAGG CGTCCTTGCA TATCTTTTGA TCACCATATC TATGTGGTTC ATGGTCGGGA CTTGGCTTTT TGCTCCCTTC CTCTTCAATC CTTCTGGTTT TGAGTGGCAG AAAATTGTTG ATGATTGGAC TGATTGGAAT AAATGGATAA ACAACATCGG GGGTATTGGT GTTCCGGCAG AAAAAAGTTG GGAATCTTGG TGGGAGGAAG AGCAAGAACA TCTCCGATAT TCCGGAAAAC GTGGTTTATG GAGTATCATG GCTGGTGATT TTCTTGATAT TGTTTGTGAT GAAGACTGTT TCGGTTGGAA GGCGGAGATT CAGCGCGAGT TTTCAGCTGA TGTTCCGGTT GATAAAGGGG CTAATATTCA TGACGTTTAT CGCAATCATT GTGATATTGA TCACACTGGC TCACATGACG ATACAAGACA TAATTGTGTG TATCCTTGCC TTTATGCCCA CAGGTTGGGG GATGCTCTTG CGTGTAAGCC GGTGGTTCAT AGAGCAGGAT TCTGGGGATC AGTGAGGACA CTAGCTCGTG GATACGAGAT AGTAATGGGA CTGTTGCTGT TCACACCAGT GGCGTTCTTG GCATGGTTTC CATTTGTGTC GGAGTTCCAA ACGCGTATGC TCTTTAATCA AGCTTTCAGT AGAGGTCTTC AGATCTCTCG TATCCTCGGA GGACACCGGA AGGATCGCTC TTCTCGTAAC AAGGAATGA |
| Length | 5709 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_6: 4991229.. 5002249 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT5G13000.1 |
| Description | glucan synthase-like 12 |
| TAIR curator summary | encodes a gene similar to callose synthase |
| Alias | [ATGSL12][CALS3][gsl12][GSL12][glucan synthase-like 12][callose synthase 3] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 9.48683 |
Ahg479268 | receptor-like kinase 902 |
| 9.8995 |
Ahg480817 | subtilisin-like serine protease 3 |
| 11.6619 |
Ahg318673 | paralog of ARC6 |
| 18.4391 |
Ahg480193 | O-Glycosyl hydrolases family 17 protein |
| 21.2132 |
Ahg493252 | guanyl-nucleotide exchange factors;GTPase binding;GTP binding |
| 22.7596 |
Ahg477867 | |
| 23.0217 |
Ahg484098 | Leucine-rich repeat protein kinase family protein |
| 23.4521 |
Ahg486880 | Leucine-rich receptor-like protein kinase family protein |
| 24.5764 |
Ahg951385 | homeobox protein 25 |
| 25.04 |
Ahg495503 | Transducin/WD40 repeat-like superfamily protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|