Detail



ID : Ahg325935

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|325935|fgenesh1_pm.C_scaffold_6001155
Sequence
ATGGGGCTTA ATTTCACAAA GTTGTTCAGC CGGCTTTTTG CCAAGAAAGA AATGAGGATT CTGATGGTAG GTCTTGATGC TGCTGGTAAG ACCACTATTC TCTACAAGCT GAAGCTTGGC GAAATCGTCA CTACCATTCC GACCATCGGA TTCAACGTGG AGACTGTTGA ATACAAGAAC ATCAGCTTCA CTGTTTGGGA TGTGGGGGGT CAGGACAAGA TTCGTCCCCT GTGGAGGCAC TACTTCCAGA ACACACAAGG TCTTATCTTT GTGGTTGATA GCAACGACAG GGACCGAGTT GTGGAGGCGA GAGATGAATT ACATCGCATG TTAAATGAGG ATGAACTGAG GGATGCTGTC CTTCTTGTGT TTGCAAACAA ACAAGATCTT CCCAACGCAA TGAATGCTGC AGAAATAACT GACAAGCTTG GACTTCACTC TCTTCGCCAA CGCCATTGGT ACATCCAAAG CACCTGTGCC ACATCTGGAG AAGGTCTTTA TGAAGGCCTT GATTGGCTCT CCAACAACAT CGCTAGCAAG GTAAATAACT AA 
Length552
Protein Sequence
Protein Residue
Map Locationscaffold_6: 5694348.. 5695463
Download Sequence
A.thaliana
AGI-codeAT5G14670.1
DescriptionADP-ribosylation factor A1B
TAIR curator summaryA member of ARF GTPase family. Arabidopsis has 21 members of this family, known to be essential for vesicle coating and uncoating and functions in GTP-binding. Gene encoding ADP-ribosylation factor and similar to ADP-ribosylation factor DcARF1 (GI:965483) (Daucus carota), other ARFs and ARF-like proteins. The gene is shown to play a role in cell division, cell expansion and cellulose production using antisense construct.
Alias[ARFA1B][ATARFA1B][ADP-ribosylation factor A1B]
Gene coexpression
MR
MR Locus Description
26.7582 Ahg903674 3'-5'-exoribonuclease family protein
32.3265 Ahg492810 NAD(P)-binding Rossmann-fold superfamily protein
37.6829 Ahg471040
40.7431 Ahg947790 Tetratricopeptide repeat (TPR)-like superfamily protein
42.6615 Ahg949999 embryo defective 2737
61.2536 Ahg477830 acyl-CoA binding protein 4
66.0681 Ahg485806 fructokinase-like 1
66.4078 Ahg935477 methionine aminopeptidase 1A
76.518 Ahg487264 pentatricopeptide (PPR) repeat-containing protein
77.5758 Ahg495674 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression