Detail



ID : Ahg327423

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|327423|fgenesh1_pm.C_scaffold_6002643
Sequence
ATGTCAGTGA AAATGAAGGG CATCTATAAA GGCTTCAAAT GTATCTCTCA AATATTTGCC GTTGAGAAAG AGAGAGATGA AATAGAAATT GGGTTTCCAA CAGACGTAAA ACATGTTGCT CATATTGGCT GGGAGGGTTC CTCTGGGAGT GCTCCTGGTT GGATGAGTGA GTTTAAGGTC GGAGCTGAGG TTCTATCACC GAGACCATCA TCTTTCAGTA ATGCAAGACC TTCTACTTCT TTTTTCACTT CTTCTTCCAC TGATTTTGAT CAAGGATCGA GTCAACGAAC AATATCAGAT ACACTAAGAG ATATACCTCC AGTAACTCCG ATAAATCTAC CAAAAAATAA CAAGAAGAAA AGTAGTAGAA GAAAGAAGTC TTCTTCATCA TCATCATCTC CAAAATCGTC AAGATCATCT ATATTATCCA AATCTTCGTA TAAATCAACT GTATCACGAC TAATCTAG 
Length468
Protein Sequence
Protein Residue
Map Locationscaffold_6: 21252091.. 21253249
Download Sequence
A.thaliana
AGI-codeAT4G04900.1
DescriptionROP-interactive CRIB motif-containing protein 10
TAIR curator summaryencodes a member of a novel protein family that contains contain a CRIB (for Cdc42/Rac-interactive binding) motif required for their specific interaction with GTP-bound Rop1 (plant-specific Rho GTPase). Most similar to RIC9 and RIC11 (subfamily group I). Gene is expressed predominantly in roots, leaves, and seedlings.
Alias[RIC10][ROP-interactive CRIB motif-containing protein 10]
Gene coexpression
MR
MR Locus Description
5.91608 Ahg891588
10 Ahg926439 F-box and associated interaction domains-containing protein
13.1909 Virus0535
15.2315 Virus1084
17.4642 Virus0614
17.4642 Virus3746
29.2404 Ahg925602
32.4037 Ahg934969
36.606 Ahg906046
37.229 Ahg350576 Mitochondrial ribosomal protein L37
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression