Detail



ID : Ahg329032

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|329032|fgenesh1_pm.C_scaffold_7001259
Sequence
ATGGGTTCTA AGTCCGTTGT TGACATGATC GAAGCTGCCT CGGGGGTACA TTTTTCTGTT TTACACGTGA ATGGCCACAT GAATGGGTTG GAACCTAGAG CAGTTAAGGA TACCACTTCT GCATCAGAAG ATATCCAAAG ACAGCCTTTT GTTATAGGTG TTGCTGGAGG CGCAGCATCG GGAAAGACTA CTGTTTGTGA TATGATAATC CAGCAACTGC ATGATCAGCG TGTTGTACTT ATTAACCTGG ACTCGTTCTA TCACAATCTG ACTGAAGAAG AACTTGCTAG AGTTCATGAA TACAACTTTG ACCATCCAGA CGCATTTGAC ACAGAGCATT TATTGTCTTG TATGGAAAAA TTGAGGCAAG GGCAAGCTGT AGATATACCA AAATACGATT TCAAAACTTA CAGGAGCAGT GTTTTCAGAA GGGTAAATCC TACGGATGTA ATAATTCTTG AAGGGATACT TTTATTCCAT GATCCACGCG TCCGAAAATT GATGAACATG AAGATTTTTG TTTGCACAGA TGCTGACGTT CGTTTGGCAA GAAGGATAAA AAGAGATACT GTCGAGAATG GTAGAGATAT CGGCACAGTA CTTGACCAGT ACTCAAAGTT TGTGAAGCCT GCTTTTGATG ACTTCATTCT TCCGACGAAG AAATATGCAG ATATTATAAT CCCTCGTGGT GGGGATAATC ATGTAGCTAT TGACTTAATT GTGCAACATA TTTGCACCAA GCTGGGTCAA CATGATCTCT GTAAAATATA TCCTAATCTC TATGTTATAC ACTCGACATT TCAGATTAGA GGGATGCACA CCCTTATACG AGATTCTCAG ACAACCAAAC ATGATTTTGT CTTCTATTCT GATCGATTGA TTAGGCTGGT TGTAGAACAT GGTCTTGGAC ATCTGCCTTT CACTGAAAAG CAAGTGATTA CTCCAACCGG ATGTGTGTAT TCTGGTGTGG ATTTCTGTAA ACGGTTATGT GGTGTCTCTG TGATTAGGAG TGGTGAGAGC ATGGAGAATG CGTTGCGAGC ATGTTGCAAA GGTATCAAGA TCGGGAAGAT CCTAATTCAC AGAGAAGGCG ACAATGGTCA ACAGCTTGTT TATGAGAAAT TGCCAAATGA TATCTCGGAG AGGCATGTCC TATTGTTGGA TCCTATTCTC GGCACAGGAA ACTCAGCGGT TGAAGCTATC AACCTCCTTA TAAGCAAGGG CGTACCTGAG GGAAACATCA TATTTCTAAA CCTTATCTCA GCACCTCAAG GTGTTCATGT TGTCTGCAAA AAATTCCCAA GAATAAAGAT AGTGACATCT GAAATCGATA ATGGGTTAAA CGACGAGTTT CGTGTTATTC CTGGTATGGG CGAGTTTGGG GACCGATATT TTGGAACAGA CGATGACTAG 
Length1410
Protein Sequence
Protein Residue
Map Locationscaffold_7: 6157875.. 6161278
Download Sequence
A.thaliana
AGI-codeAT4G26510.1
Descriptionuridine kinase-like 4
TAIR curator summaryOne of the homologous genes predicted to encode proteins with UPRT domains (Uracil phosphoribosyltransferase). Five of these genes (At5g40870, At3g27190, At1g55810, At4g26510 and At3g27440) show a high level of identity, and are annotated as also containing a N-terminal uracil kinase (UK) domain. These genes are referred to as UKL1 (UK-like 1), UKL2, UKL3, UKL4 and UKL5, respectively.
Alias[UKL4][uridine kinase-like 4]
Gene coexpression
MR
MR Locus Description
3.4641 Ahg490505 K+ efflux antiporter 1
10 Ahg486086 homolog of yeast autophagy 18 (ATG18) D
13.4164 Ahg475156 DNA-binding storekeeper protein-related transcriptional regulator
14.7648 Ahg489219 Transmembrane CLPTM1 family protein
16.9706 Ahg943928 GTP-binding protein-related
17.1464 Ahg477157 Protein kinase superfamily protein
17.3205 Ahg478051 NagB/RpiA/CoA transferase-like superfamily protein
20 Ahg946047 Zinc finger, RING-type;Transcription factor jumonji/aspartyl beta-hydroxylase
21.2838 Ahg926777 Phosphoribulokinase / Uridine kinase family
23.6643 Ahg490687 Homeodomain-like superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression