| Annotation |
|---|
| Description | jgi|Araly1|329544|fgenesh1_pm.C_scaffold_7001771 |
| Sequence |
ATGGGTTACT GGAATTCGAA GGTTGTTCCA AAGTTCAAGA AGTTATTTGA GAAAAATAGT GCTAAGAAGG CGGCTGCTGC TGAAGCTACC AAGACCTTTG ATGAGTCTAA GGAAACAATC AACAAGGAAA TTGAGGAGAA AAAGACAGAA CTCCAACCAA AGGTCGTGGA AACCTATGAA GCCACGTCTG CCGAAGTCAA GGCTTTGGTG AGAGCCCCTA ATGAGTCTGG TTTGAAGAAA AACTCAGCGG CTGTGCAGAA GTACCTCGAG GAGCTTGTCA AAATTGAATT CCCCGGATCA AAAGCGGTGA GTGAAGCGAC GTCTAGCTTC GGAGCTGGCT ATGTCGCAGG ACCGGTCACA TTCATATTCG AGAAGGTATG TGTTTTCCTC CCTGAGGAGG TGAAGACAAA AGAAATACCG GTGGAGGAAG TGAAAACGGA AGAACCTGCC AAAACTGAAG AACCAGCCAA AACGGAAGAA CCAAGTGGTG AGAAAGAGGA GATTGTTGAA GAGGTCAAGA AAGACGAGAC CCCTGCTACC GCAGTCGTGG AGGAGAAGAA ACCAGAGGTA GAGGAGAAGA AGGAAGAAGC TACTCCGGCT CCGGCGGTGG TTGAAACTCC AGTTAAGGAA CCGGAAACGA CGACAGCGCC TGTGGCTGAA CCACCAAAGC CTTGA |
| Length | 675 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_7: 9084876.. 9086409 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT4G20260.4 |
| Description | plasma-membrane associated cation-binding protein 1 |
| TAIR curator summary | Encodes a Ca2+ and Cu2+ binding protein. N-terminal myristylation on glycine 2 appears to enable it to associate tightly with the plasma membrane. Recombinant PCaP1 interacts strongly with phosphatidylinositol 3,5-bisphosphate (PtdIns(3,5)P2) and PtdIns (3,4,5)P3, and weakly with PtdIns(3,5)P2 and PtdIns(4,5). It also interacts with calmodulin (CaM) in a calcium-dependent manner. CaM does not interfere with PCaP1 membrane localization but does weaken interactions between it and the PtdInsPs. PCaP1 has an apparent Kd of 10 uM for Cu2+ and can bind six ions per protein. Transcript levels for PCaP1 first fall and then rise following exposure to CuCl2. Mannitol, sorbitol, and the flg22 oligopeptide also increase expression levels. |
| Alias | [ATPCAP1][MDP25][PCAP1][ARABIDOPSIS THALIANA PLASMA-MEMBRANE ASSOCIATED CATION-BINDING PROTEIN 1][microtubule-destabilizing protein 25][plasma-membrane associated cation-binding protein 1] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 1 |
Ahg926577 | PATELLIN 1 |
| 4 |
Ahg493941 | |
| 4.69042 |
Ahg472493 | PATELLIN 2 |
| 4.89898 |
Ahg496326 | Integrase-type DNA-binding superfamily protein |
| 5.19615 |
Ahg919640 | Major facilitator superfamily protein |
| 5.47723 |
Ahg926547 | sucrose-proton symporter 1 |
| 5.83095 |
Ahg484102 | endoxyloglucan transferase A3 |
| 7.61577 |
Ahg946428 | Polyketide cyclase/dehydrase and lipid transport superfamily protein |
| 10.4881 |
Ahg491400 | gamma vacuolar processing enzyme |
| 14.3178 |
Ahg476684 | bifunctional nuclease in basal defense response 1 |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
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| Growth Chamber expression |
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