| Annotation |
|---|
| Description | jgi|Araly1|330043|fgenesh1_pm.C_scaffold_7002270 |
| Sequence |
ATGGCAACGG CGTCGTTTAA CATGCAGTCA GTGTTCGCTG CTCCTTCCGG TGTATTGAAA TCATCACGTA ACATCAGAAA CACAAACCAA CTCTTCTTCA AGAGGAATGC TCCGGTGGGA GTCAGATGCA TGGCTCAGGG CGATCCTATC AAGGAAGATC CTTCTGTGCC CTCGACCTCG ACTTCGGCCG CTCCGCCGCA AATGCCACCG TCTCCTCCTC CACCAGTTAG CAAGCCTAAG GTGAGTACGA AGTTTGGAGA TTTACTAGCA TTTAGCGGTC CAGCACCTGA GAGGATCAAC GGGAGACTAG CAATGGTTGG ATTCGTGGCG GCCATCGCCG TGGAGTTGTC AAAGGGAGAA AACGTGTTTG CTCAGATCTC TGACGGTGGC GTTGGGTGGT TTCTTGGAAC AACAGCGTTG CTGACGTTGG CATCGATGGT TCCGTTGTTC AAGGGAATAA GAGCAGAGTC AAAGTCAAAA GGGTTCATGA CCTCAGACGC CGAGCTATGG AACGGTCGGT TCGCTATGCT TGGTCTCGTT GCGTTGGCCT TCACTGAGTA CGTCACTGGT GGGACTCTCA CTGAAACAAG ACAGAGAAAA GAGAATCTCC GAGGAAAACA AAAGTTGATG GCGACGGCTA AGCTTCAAGC TCTCTGGAAT CACCCGGCAG GACCAAAGAC GATTCATTTC TGGGCTCCAA CATTTAAATG GGGTATAAGC ATTGCTAACA TTGCAGATTT CCAAAAACCT CCAGAAAATA TTTCATACCT TCAGCAAATT GCTGTGACAT GCACTGGAAT GATTTGGTGT CGTTGCAGCA CTGTAATTAC TCCTAAAAAC TGGAACCTGT TTAGTGTTAA TGTTGCTATG GCAGCTACAG GGATATACCA ACTTGCTCGC AAAATAAAGT ATGATTATGT ATCTGAAGCT GAGGCTGCTG TTGAAATTGA ATGA |
| Length | 954 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_7: 12841684.. 12844331 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT4G14690.1 |
| Description | Chlorophyll A-B binding family protein |
| TAIR curator summary | Encodes an early light-induced protein. ELIPs are thought not to be directly involved in the synthesis and assembly of specific photosynthetic complexes, but rather affect the biogenesis of all chlorophyll-binding complexes. A study (PMID 17553115) has shown that the chlorophyll synthesis pathway was downregulated as a result of constitutive ELIP2 expression, leading to decreased chlorophyll availability for the assembly of pigment-binding proteins for photosynthesis. |
| Alias | [ELIP2][EARLY LIGHT-INDUCIBLE PROTEIN 2] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 1 |
Ahg930279 | Chlorophyll A-B binding family protein |
| 4.89898 |
Ahg490053 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein |
| 4.89898 |
Ahg481185 | Late embryogenesis abundant protein, group 6 |
| 4.89898 |
Ahg491430 | tocopherol cyclase, chloroplast / vitamin E deficient 1 (VTE1) / sucrose export defective 1 (SXD1) |
| 5 |
Ahg924738 | flavin-monooxygenase glucosinolate S-oxygenase 4 |
| 5.19615 |
Ahg919141 | Major facilitator superfamily protein |
| 6 |
Ahg313816 | nitrate transporter 1.5 |
| 6.63325 |
Ahg485985 | Regulator of chromosome condensation (RCC1) family protein |
| 6.63325 |
Ahg934499 | SOUL heme-binding family protein |
| 7.61577 |
Ahg944483 | aldehyde dehydrogenase 3I1 |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
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| The four seasons |
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| Growth Chamber expression |
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