Detail



ID : Ahg330113

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|330113|fgenesh1_pm.C_scaffold_7002340
Sequence
ATGCCTCACA GAGACCACAT CGCCTGGGCC TCGGTTCTCA CAGCTCTTAA TCAAGCGAAT CTCTCTGGTA AGACTCTCTG GGTCTTTTCT TCAGTGGGTT CGAGCTCTGG GTTGCGTCCT GATGATTTTG TGTTCTCGGC TCTTGTTAAG GCTTGTGCTA ACTTAGGATC TATTAAGCTC GGGAAGCAAG TTCATTGCCA TTTTATAGTC TCTGAGTATT TCAATGATGA TGTTGTTAAG TCTTCACTGG TTGATATGTA TGCTAAATGT GGGTTGCTCG ATAGCGCTAA AGTAGTTTTT GATTCTATAA GAGGGAAAAA CACCATTTCA TGGACTGCAA TGGTATCTGG ATATGCGAAA AGCGGAAGAA AGGAAGAAGC TTTGGAGCTT TTTAGGAGAT TACCAGTCAA GAATTTGTAT TCTTGGACTG CATTGATCTC TGGTTTTGTA CAGAGTGGGA AAGGTCTTGA AGCTTTTTCT GTGTTCACTG AAATGAGGAG AGAAAGAGTT GACATTTTGG ATCCCTTAGT TCTTTCGAGT ATTGTTGGTG CTTGTGCTAA TTTGGCAGCT TCAATAGCGG GGAGGCAGGT TCACGGTTTG GTTATAGCTT TAGGATTTGA TTCTTGTGTG TTTATTAGTA ATGCGCTTAT CGATATGTAT GCTAAATGCA GCGATGTTAT AGCTGCAAAG GATATTTTCA GTAGAATGCG CCACAGAGAT GTAGTTTCAT GGACATCGCT TATAGTTGGA ATGGCTCAGC ACGGGCAGGC TGAGAAGGCA TTGGCTTTGT ATGATGACAT GGTTTCTCAC GGTGTAAAGC CCAATGAGGT CACATTTGTT GGGTTGATAT ACGCGTGTAG CCATGTCGGT TTTGTAGCTA AAGGCCGTGA GCTTTTCCAA TCAATGACCA AGGACTACGG AATTCGCCCA TCCTTGCAGC ATTATACATG CTTATTGGAT CTTCTTGGTC GGTCTGGACT CCTTGATGAG GCTGAGAACT TAATTCATAC AATGCCGTTT CCTCCAGATG AACCAACATG GGCTGCTCTA CTTAGTGCCT GTAAGCGCCA GGGACAAGGT CAGATGGGTG TAAGAATCGC TGATCATCTC GTAAGCAGCT TTAAACCGAA AGATCCATCA ACTTATATAC TTCTATCAAA CATCTATGCA AGTGCTTCTT TGTGGGGAAA AGTATCGGAA ACAAGAAGGA AACTAGGAAA CATGGAAGTT AGAAAAGATC CAGGGTACAG TAGCGTTGAG GTACGGAAAG AAACCGAAGT GTTTTACGCA GGAGAAACAT CTCATGCTCT AAAAGAAGAC ATCTTTCGAT TGCTTAAGAA GCTAGAGGAA GAAATGAGGA TAAGAAATGG TTATGTTCCT GATACTAGTT GGATCCTACA CGACATGGAT GAGCAAGAGA AAGAAAAGCT TTTGTTTTGG CATAGCGAAC GATCCGCTGT TGCATACGGA TTGCTTAAAG CTGTTCCGGG AACTCCAATA CGAATTGTGA AAAATCTAAG GGTTTGTGGA GATTGTCATG TTGTTCTGAA ACATATAAGT GAAATTACAG AAAGAGAGAT TATAGTTCGA GATGCGACTA GATATCATCA TTTTAAGGGA GGAAAATGTT CCTGCAATGA CTTCTGTAAC TACGGTCACG CAAAATCGAT TTCTATCCTC AGTAAAGAAA CAATAAAGTG GAGACGTGTA GCTTCACTAC TTCCACATAC TGAGAGTGAG AGAGAAATGG CGACGGAAAC CGTATTGGCC ACGGCGGTGA GCAACGGCAG AAGCAAAGGA TGTTGCAAGT CCGGTCCAGG TTACGCGACG CCTCTAGCCG CCATGGCTGG TCCACGGGAA AAGCTCATCT ATCTCACCGC CCTCTACTCC GGAACGGGGC GAGACAAACC GGACTACTTG GCGACGGTGG ATGTGGATCC TAACTCACCC ACATATTCAA GTGTCATTCA CAGGTTGAAA ATGCCTTATA TAGGTGATGA GCTTCACCAC ACTGGTTGGA ACTCTTGCAG CTCTTGCCAT GGTGATGCTT CTGCTGATAG ACGTTACCTC GTCTTACCAG GCTTAATCTC TGGTCGCATT TATGCAATCG ACACAAAGAC CGACCCAAAG GCTCCATCTT TGTACAAGGT TGTAGAGCCT GAAGAGATTG CTAAAAAAAC AGGATTAGCA TTTCCACATA CATCTCATTG CCTCGCCTCG GGTGATATGT TGGTGTCTTG CCTTGGGGAC AAAGAAGGAA ACGCCAAAGG GAACGGGTTT CTCCTTCTTG ACTCTGACTT CAATGTCAAA AGCAGGTGGG ACAAACCAGG ACATGGTCCT TTGTTTGGGT ATGATTTTTG GTACCAACCT CGGTTCAAGA CAATGATCAG CACTTCTTGG GGTGCGCCTA AAGCCTTCTC CAAAGGTTTC AATCTCCAGC ACGTTGCTGA TGGCTTATAT GGAAGTCATT TACATATTTA TAAATGGCCT GAAGGTGAAA TGAAGCAGAT TATTGACCTC GGAAATACCG GTCTCTTACC TCTTGAGATT AGATTCTTGC ATGATCCTTC TAAAGATACA GGGTATGTCG GGATGATGAC ACATGGAGCC ATGAGGCAAG TGGTTATATC GGTTAAACCT CTGAAAGTTG AAAACTGGAT TCTTCCAGAA ATGCCGGGGC TTATCACCGA CTTCTTGATC TCCCTCGATG ACCGGTTTTT CTACTTTGTG AACTGGCTTC ATGGAGACAT CCGTCAGTAC AACATCGAAG ACCCTAAAAA CCCGGTCTTA ACGGGACAAA TTTGGGTCGG AGGATTACTA CAAAAGGGTA GTCCTTACAA GGCTGTTGGA GAAGATGGTA ACACTTACCA ATTTGACGTT CCGCAGATCA AGGGGAAGTC TCTACGAGCA GGACCTTAGA TGATCCAACT AAGCCTCGAC GGGAAAAGAT TGTACGCGAC AAACTCGCTA TTTAGCGCGT GGGACCGTCA GTTTTACCCG GAACTCATGG ATAAAGGCTC ACACATCATT CAAATCGATG TTGACACAGA CAAAGGTGGT CTCACCATAA ACCCTGACTT CTTTGTGGAC TTTGGTGATG AACCAGACGG TCCTGCACTA GCCCACGAGA TGAGATATCC CGGTGGAGAC TGCACTTCCG ATATCTGGAT CTGA 
Length3174
Protein Sequence
Protein Residue
Map Locationscaffold_7: 13500520.. 13508167
Download Sequence
A.thaliana
AGI-codeAT4G14050.1
DescriptionPentatricopeptide repeat (PPR) superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
30.9839 Ahg475503 GPCR-type G protein 1
40.0999 Ahg480529 DWD (DDB1-binding WD40 protein) hypersensitive to ABA 1
41.2311 Ahg330015 Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein
42.1307 Ahg492669
45.8039 Ahg497339 AGAMOUS-like 31
47.244 Ahg925558
49.4267 Ahg487896 methyltransferases
50.4381 Ahg485823 TRICHOME BIREFRINGENCE-LIKE 36
54.0278 Ahg921304
61.8385 Ahg333070 NADPH dehydrogenases
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression