Detail



ID : Ahg331078

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|331078|fgenesh1_pm.C_scaffold_8000421
Sequence
ATGTTGGACA TCGATCTATA TCGAAGAAAT CCGGAGATCA TCCGAGAGTC TCAGCGCCGG AAATTCGCCA GCGTCCAAGA CGTTGATGAG ATAATCATTC TCGACCAACT ATGGCGTCAG CGCAAATATG ATTATGATTG TGTCCAAAGA GTGTTCAACA AGATAAACAA TTCTGTGGCC AAGCTCAAAA TATCTGGTGC TGATGCAACT GAGCAGATTA AGCAAGCAGA GATTATCAAA CAAGAAGCAA CCAAGAAAGG TGTGGAAGTT GGTGAAGCTT TTGCTGCTTT GCAAGACAAA TTGTTGACAG TAGGAAATCT CATCCATGAC TCGGTTCGAA TTTGTGACGA TGAGGCTTTT AATGAAGAGA TCAACGTTTG GGGTGAAAAG CCGCTTCTCG ATATTGTTGA TACCAAGAGA GGTGCTAAAA TATCTGGAGC TAGAGGGTTT TTACTAAAAG GATATGGTGT TGCTCTTAAC CAAGCTCTTA TCTTTCAGGT TAAAAGCTGC ATCTTCATTA TCAACTATTC ACTAACCTTC TTAACAAAGA AAGGTTTCAC ATGTATACAA CCTAATTTTC TTATGAGGAA GGAGGTCATG GAAAAGTGCG CACAATTGTC GCAATTTGAT GAAGAACTAT ACAAGGTGAT TGGTGAAGGA GATCATGATG AGAAATACCT TATTGCAACT TCTGAGCAAC CTCTTTGTGC TTACCATCAA AATGAATGGA TCCAACCTAG TGAGCTTCCC ATAAGATATG CAGGTTACTC GACTTGCTTT CGAAAAGAAG CCGGTTCCCA TGGAAGAGAT ACACTTGGCA TTTTCCATGT TCATCAGTTT GAGAAAGTTG AACAGTTTTG CATCACAAGT CCTAATGATT CTTGGGAAAT GCTCGATGAG ATGATGAAGA ACTCAGAAGA TTTTTACCAA TCGCTTAAAA TTCCATACCG AGTTGTGTCG GATGTCTCTG GAGCTTTGAA CAATGCAGCT GCTAAAAAGT ATGACTTGGA AGGATGGTTT CCTTCGTCAG AGACTTATAG AGAGCTTGTG TCCTGTTCCA ACTGTACAGA CTATCAGTCT CGAAGGCTTC GGATCAGATA CGGTCATAAA AAGAGCAATG ATCAGCAGAC TAAGAACAAG TATGTCCATA TGCTGAATTC GACCCTTACC GCGACACAGA GGACTATTTG TTGTATTCTT GAGAACTACC AGCGAGAGGA TGGTGTGGAC ATCCCTGAGG TTCTTCAACC TTTCATGGGG GGAGTGACGT TTTTGCCTTT CAAGATGTGT AAGACCCAAG GCAAAAAATC TACAGCTTGA 
Length1320
Protein Sequence
Protein Residue
Map Locationscaffold_8: 4323540.. 4339700
Download Sequence
A.thaliana
AGI-codeAT5G27470.1
Descriptionseryl-tRNA synthetase / serine--tRNA ligase
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
2 Ahg890911 Gibberellin-regulated family protein
2 Ahg900440 N-acetylglucosaminylphosphatidylinositol de-N-acetylase family protein
2.82843 Virus3266
3.4641 Ahg943049 cyclin-dependent kinase D1;3
4.47214 Ahg923702
5.47723 Ahg914034 Plant invertase/pectin methylesterase inhibitor superfamily protein
6.48074 Ahg488344
7.68115 Ahg481802
8.7178 Ahg470066
9.38083 Ahg935868
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression