Detail



ID : Ahg331830

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|331830|fgenesh1_pm.C_scaffold_8001173
Sequence
ATGCTTTCAA TACGCAGAAG CTTATTGACT CTAGCCAAAG AGCAAAAAGA TTTGTTTTTG TTGTTGTGTA ATCTCCGAGC TCGATTTGTA TCTACAGATA ACTATGATCC ACCATTTTCG CCTCTCTCAA AACCCACTAA ACCTCCAAAA GAGACGAAGA AGACGAAGAA GAAGCAAGAT CAGTCGTCGG AGCTGAAGAT TCCGGTGATT TCAGACCTTC CTTTCGATTT TAGGTATTCG TATTCAGAAA CCAACCCGGA AATTGAACCA ATTGGATTCC GTGAACCGAA ACGGTTTTCT CCTTTTGGAC CGGGTCGATT GGACCGGAAA TGGACCGGTA CTTCCGCACT AGCTTCGCCG GAGATTGATC AGAGTCAATG GGTGGAGGAG AGAACAAGAG TTCTCGGCGA GCCTTTGACA GAGGAAGAAG TTACAGAGCT TGTTGAACGG TATCGGCATA GTGATTGTTC ACGACAGATT AATCTCGGGA AAGGTGGTGT GACTCACAAT ATGATAGATG ATATTCATAA CCATTGGAAG AAAGCTGAGG CAGTGAGGAT CAAATGCTTG GGAGTACCAA CTCTTGACAT GGACAACATA TGTTTCCACC TCGAGGAAAA ATCTGGTGGA AAGATTGTAT ACAGACACAT AAACATTCTA GTTTTGTACC GGGGAAGGAA TTATGATCCG AAGAATCGTC CCATCATACC ACTCATGTTG TGGAAGCCTT ATCCACCGAT ATACCCAAGA CTTGTAAAGA ATGTCGCCGA TGGGTTAACA TTTGAAGAGA CCAAAGAGAT GAGAAATCGC GGGCTTCATT CTCCTGCCTT AATGAAACTT ACAAGGAATG GTGTCTATGT TAATGTTGTG GGAAGAGTGA GGGAGGAGTT TGAAACAGAA GAGATTGTGA GACTAGATTG CACTCATGTT GGGATGAGTG ACTGCAAACG AATCGGTGTG AAACTAAAGG ATTTGGTTCC ATGTGTTCCC ATATTGTTCA AAGATGAGCA AATCATACTC TGGAGAGGGA AGAGGAATGG TGAAGAAGAG CTTTTTTCAC TCTGTGAAAA CTTTAATCCG GAACAATGA 
Length1089
Protein Sequence
Protein Residue
Map Locationscaffold_8: 15796068.. 15797582
Download Sequence
A.thaliana
AGI-codeAT5G54890.1
DescriptionRNA-binding CRS1 / YhbY (CRM) domain-containing protein
TAIR curator summary
Alias[mCSF2][mitochondrial CAF-like splicing factor 2]
Gene coexpression
MR
MR Locus Description
29.2575 Ahg951350 acyl-CoA oxidase 2
39.6485 Ahg491300
63.3561 Ahg481908 alternative NAD(P)H dehydrogenase 2
72.9383 Ahg487924 CBL-interacting protein kinase 5
73.3212 Ahg476836 thioredoxin Y1
80.4984 Ahg471019
84.0238 Ahg899726 zinc ion binding;nucleic acid binding
88.9944 Ahg944515 Tetratricopeptide repeat (TPR)-like superfamily protein
93.2416 Ahg947495 DEK, chromatin associated protein
98.4683 Ahg949071 ubiquitin-like protein 5
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression