Detail



ID : Ahg333077

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|333077|fgenesh1_pm.C_scaffold_9000105
Sequence
ATGATTGAAC AACCGGGAAC AATTTACTTA CGATACTTAG TTGACATTCA TAAAAAGTAT CTAATGAATT ATGAGTTCAA TACATCCTGT TTAGCAGAAA GACGGATATT CCTTGCTCAT TATCAGACAA TCACTTATTC ACAAACTTCG TGTGGGGCTA ATAGTTTTCA TTTCCCGTCT CATGGAAAAC CCTTTTCGCT CCGCTTAGCC CTATCCCCCT CTAGGAGTAT TTTAGTGATA GGTTCTATAG GAACTGGACG ATCCTATTTG GTCAAATACC TAGCGACAAA CTCCTATGTT CCTTTCATTA CAGTATTTCT GAACAAGTTC CTGGATAACA AGCCGAAAGG TTTTTTTATT GATGATATCG ATATTGATGA TAGTGACGAT ATTGATGCTA GTAACGATAT TGATCGTGAA CTTGATACGG AGCTGGAGCT TCTAACTATG ATGAATGCGC TAACTATGGA TATGATGTCG GAAATAGACC GATTTTATAT CACCCTTCAA TTCGAATTAG CAAAAGCAAT GTCTCCTTGC ATAATATGGA TTCCAAACAT TCATGATCTT GATCACTTTT TCACTCTTTC CTATACTAGG GGATTTCACT TGGAAAAGAA AATGTTCCAT ACTAATGGAT TCGAGTCTAT AACCATGGGT TCCAGTGCAC GAGATCTTGT AGCACTTACC AATGAGGCCC TATCAATTAG TATTACACAG AAGAAATCAA TTATAGACAC TAATACAATT AGATCTGCTC TTCATAGACA AACTTGGGAT TTGCGATCCC AGGTAAGATC GGTTCAGGAT CATGGGATCC TTTTCTATCA GATAGGAAGG GCTGTTGCAC AAAATGTACT TATAAGTAAT TGCCCCATAG ATCCTATATC TATCTATATG AAGAAGAAAT CATGTAACGA AGGGGATTCT TATTTGTACA AATGGTACTT CGAGCTTGGA ACGAGCATGA AGAAATTCAC GATACTTCTT TATCTTTTGA GTTGTTCTGC CGGATCGGTC GCTCAAGACC TTTGGTCTCT ACCCGTACCC GATGAAAAAA ATAGGATCAC TTCTTATGGA TTCATTGAGA ATGATTCGGA TCTAGTTCAT GGCCTATTAG AAGTGCAAGG CGCTTTGGTG GGATCCTCAC GGACAGAAAA AGATTGTAGT CAGTTTGATA ATGATCGAGT GACATTACTT TTTCGCTCCG AACCAAGGGA TCCCTTATAT ATGATGCAAG ATGGATCTTG TTCTATCGTT GATCAGAGAT TTCTCTATGA AAAATACGAA TCGGAGTTTG AAGAAGGGGA AGGAGAAGGA GTCCTCGACC CGCAACAGAT AGAGGAGGAT TTATTCAATC ACATAGTTTG GGCTCCTAGA ATATGGCGCC CTCGGGGCTT TCTATTTGAT TGTATCGAAA GGCCTAATGA ATTGGGATTT CCCTATTCGG CCGGGTCATT TCGGGGCAAG CGGATCATTT ATGATGAAAA GTATGAGCTT CAAGAGAATG ATTCGGAGTT CTTGCAGAGC GGAACCATGC AGTACCAGAG ACGAGATAGG TCTTCCAAAG AACAAGGCTT TTTTAGAATA AGCCAATTCA TTTGGGACCC CGCAGATCCA CTCTTTTTCC TATTCAAAGA TCAACCCTTT GTCTCTGTGT TTTCACATCG AGAATTCTTT GCAGATGAAG AGATGTCAAA GGGGCTTCTT ACTTCCCAAA CGGATCCTCC TACATCTATA TATAAACGCT GGTTTATCAA GAATACGCAA GAAAAGCACT TCGAATTTTC ATTATCTAAT GGATTTTTCC GTTCTAATAC TCGATCCGAG AGTTATCAGT ATTTATCAAA TCTGTTCCTA TCTAATGGAA CGCTATTGGA TCGAATGACA AAGACATTGT TGAAAAAAAG ATGGCTTTTC TCGGATGAAA TGAAAATAGG ATTCATGTAA 
Length1950
Protein Sequence
Protein Residue
Map Locationscaffold_9: 1629311.. 1631493
Download Sequence
A.thaliana
AGI-codeATCG01280.1
DescriptionChloroplast Ycf2;ATPase, AAA type, core
TAIR curator summaryhypothetical protein
Alias[YCF2.2]
Gene coexpression
MR
MR Locus Description
5.65685 Ahg359747 Pseudouridine synthase/archaeosine transglycosylase-like family protein
6.32456 Ahg891432
6.9282 Ahg350576 Mitochondrial ribosomal protein L37
13.5277 Ahg899462
16.2481 Ahg933830 cellulose synthase-like B
17.1464 Ahg952449 indole-3-acetic acid inducible 9
19.799 Ahg934969
35.6651 Ahg923569
41.5692 Ahg887850
45.3652 Ahg918683 MLP-like protein 28
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression