Detail



ID : Ahg335142

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|335142|fgenesh1_pg.C_scaffold_1001707
Sequence
ATGGGAAAGC CTGCTAGGTG GTTAAAAAGT GTACTACTTG GAAAGAAACC ATCTAAATCT AGTGGTTCTA AAGATAAGGA GAGAATTGTG AATGGAAAAG AAGTAGTGGT TATTTCAAAG ATTGAAGAAT CCGATGTTGT TTCAGATCTT CCATCCATTG GAAATGCAGC AATTTACACC AGTGGTATGG CAGAGACACA GAATCTAGAA CATGAAAATG TTTCAGACAA CGAGATACAA GTTTCCGAGG TTCAACCAAC AGATTCTCAA GATGCTGCTT CTGTTCCTGA TGATTCGCTA TCCGAATCAG AGAAAATTCA ACAAGAGATT GCAGCAGTTA CCGTGCAGGC TGTGTATAGA GGCTACTTGG CTCGACGTGC TTTCAAGATA TTAAAAGGTA TAATAAGGCT ACAAGCACTT ATCCGTGGTC ACATGGTTAG GAGGCAAGCT GTTTCGACTC TGTGCTGTGT TATGGGAATT GTCAGATTGC AAGCACTTGC TCGAGGAAGA GAGATCAGAC ATTCCGACAT TGGAGTTGAA GTTCAGAGGA AATGCCGGTT TTATCATCAG CCTTTAGAGA ATAAAGCAAA ATCTGTTGTT GATACACATA CTTACCTGGG AATCAAGAAG CTAACAGCAA ATGCTTTTGC TCAGAAGCTT CTAGCTTCAT CGCCAAACGT GATGCCGTTG TCCCTTGACA ATGATTCTTC CAGTTCAATC TGGTTAGAGA ACTGGTCAGC TTCTTGCTTC TGGAAACCAG TTCCTCAGCC AAAGAAAGTA TCAGTCAGAA AAACTCAGAA GAAGTTTGCC AGTAATTCTC AGATAGTCGA GGCTGAGTTT GCTAGACCAA AGAAGAGTGT TCGCAAAGTC CCTACTTCAA ATCTCAACAG TTCCCCGGTG GCACAGACAT CATTTGAGTT TGAGAAACCC AAACGCAGCT TCCGCAAGGT TTCAACAAGC CAATCTGTAG AACCTCTTCC GGCTATGGAC AATCCTCAAG TTGATCTAGA AAAAGTGAAA CGCGGCTTGA GGAAAGTACA TAATCCCGTA GTTGAGAACT CTATCCAACC TCAAGTGGTT CCACAGATTG CAGTCGAAAA GCCAAATGCT GGTTTAGAAG AATCTGTGAA TGCCTTTGAT GGAGAGAAAG ATGATGAAGT GGCTGAGACA GTGGTGGAAC AACAACCTGA GGAGTTAATA CAAACTCATA AACCATTGGG AAACAATGAA GCACTTGATT CCACTTTGGT CAACCAAATC GAAGAGAGTG AAGAAACTGT AATGGCTGAG GAAAAGGAGG ATGCAAAAGA AGAGAGAACT CCCAAACAAA ACCATAAGGA AAATTCAGCT GGCAAGGAGA ATCAGAAATC CGGGAAAAAG GCTTCTTCGG TTACTACTAC TCAAACCGCC GAGTGTCAAG AGAGTGGTAA TGGTAATCAG ACTAGTAGCC CGGGAATACC GAGCTATATG CAGGCGACTA AATCCGCTAA AGCAAAGCTG AGGCTACAAG GTTCTTCTTC ACCTAGGCAA CTGGGGACTA CTGAGAAAGC CAGTAGACGT TACTCTCTAC CATCTTCAGG TAATAGTGCA AGAGTCACTT CTCATTCTCC TAAAACAAGA GTCTCTCACT CGGGTGGCAA AAACGGGAAT AAGACAGAGA AACCTCTTCT TTCGTCCCGA GAAGGAAACG GGAAGACAAC TCCGGTAGAG TGGAAGAGAT GA 
Length1722
Protein Sequence
Protein Residue
Map Locationscaffold_1: 7588839.. 7591143
Download Sequence
A.thaliana
AGI-codeAT1G18840.1
DescriptionIQ-domain 30
TAIR curator summary
Alias[IQD30][IQ-domain 30]
Gene coexpression
MR
MR Locus Description
12.49 Ahg472662 MLP-like protein 423
17.7764 Ahg494383 GDSL-like Lipase/Acylhydrolase superfamily protein
18.4932 Ahg495241 subtilase 1.3
18.6011 Ahg480193 O-Glycosyl hydrolases family 17 protein
26.2679 Ahg483263 Leucine-rich repeat protein kinase family protein
28.9137 Ahg485662 Family of unknown function (DUF662)
29.0861 Ahg486566 FASCICLIN-like arabinogalactan-protein 10
31.305 Ahg485285 IQ-domain 21
33.9411 Ahg496451 tubulin beta chain 2
35.3553 Ahg494557 tubulin alpha-2 chain
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression