| Annotation |
|---|
| Description | jgi|Araly1|335174|fgenesh1_pg.C_scaffold_1001739 |
| Sequence |
ATGAAGGCTC CATCAAATGG GTTTCTTCCC ACTTCCAACG AAGGTGAGAA GAAACCAATC AATTCTCAAC TATGGCACGC TTGTGCAGGG CCTTTAGTTT CATTGCCTCC TGTGGGAAGT CTTGTGGTTT ACTTTCCTCA AGGACATAGC GAGCAAGTTG CAGCATCGAT GCAGAAGCAA ACTGATTTTA TACCAAATTA CCCAAATCTT CCTTCTAAGC TGATTTGCTT GCTTCACAGT GTTACATTAC ATGCTGATAC CGAGACCGAT GAAGTCTATG CACAAATGAC TCTTCAACCT GTGAATAAGT ATGATAGAGA AGCATTGCTA GCTTCTGATA TGGGCCTGAA GCTAAACAGA CAACCTACTG AGTTTTTTTG CAAGACTCTT ACTGCAAGTG ACACAAGCAC TCATGGTGGA TTCTCTGTAC CGCGTCGTGC AGCTGAGAAG ATATTCCCTC CTCTTGATTT CTCGATGCAA CCACCTGCGC AAGAGATTGT AGCTAAAGAT TTACATGATA CTACATGGAC TTTCAGACAT ATCTATCGAG GCCAACCAAA AAGACACTTG CTTACCACAG GTTGGAGCGT TTTTGTTAGC ACAAAGAGAC TTTTCGCGGG TGATTCAGTT TTGTTTGTAA GGATTGGACT TTCCTCTTCT CATAAGGGCA CTTGGGTTTG CAGAGATGAG AAATCACAGC TGATGTTGGG TATAAGACGT GCAAATAGAC AAACTCCGAC TCTTTCCTCA TCGGTCATAT CCAGCGACAG TATGCACATT GGGATTCTTG CAGCTGCAGC TCATGCTAAT GCCAATAGTA GCCCTTTTAC CATCTTCTTC AATCCAAGGG CAAGTCCTTC AGAGTTTATT GTTCCTTTAG CCAAATACAA CAAAGCCTTG TACGCTCAAG TATCTCTAGG AATGAGATTC CGGATGATGT TTGAGACCGA GGATTGTGGG GTTCGCAGAT ATATGGGTAC AGTCACTGGT ATTAGTGATC TGGACCCTGT AAGATGGAAA GGCTCACAAT GGCGTAATCT TCAGGTAGGA TGGGATGAAT CAACAGCTGG AGATAGGCCA AGCCGAGTAT CTATATGGGA AATCGAACCC GTCATAACTC CTTTTTATAT ATGTCCTCCT CCATTTTTCA GACCTAAGTA CCCGAGGCAA CCGGGGATGC CAGATGATGA GTTGGACATG GAAAATGCTT TCAAAAGAGC AATGCCTTGG ATGGGAGATG ATTTTGGGAT GAAGGACGCG CAGAGTTCGA TGTTCCCTGG TTTAAGTCTA GTTCAATGGA TGAGTATGCA GCAAAACAAT CCATTGTCAG GTTCTGCTAC TCCTCAGCTC CCGTCTGCGC TCTCATCTTA TAACCTACCA AACAATTTTG CTTCCAATGA CCCTTCGAAG CTGTTGAACT TCCAGTCCCC AAACCTCTCT TCCGCAAATT CCCAATTCAA CAAATCAAAC ACGGTTAACC ATATCAGCCA ACAGATGCAA GCACAACCAG CCATGGTGAA ATCTCTACAA CAACAACAAC AACAACAACA ACAACAGCTG CAACAACAAC AACAACAACA ACTACAGATG TCACACCAAC AGCTGCAGCA ACAAGGGAAT TATAGCAATG GTGCGAGTGC TGTTGCTAAC CAAGTCTCTT GTCAAAATCC AAACCAACCT ACTGGATTCT CTCAGTCTCA GCTTCAGCAG CAGTCAATGC TCCCTAGTGG TGCTAAAATG ATACACCAGA ACATAAATTC AGTGGGGAAT AAAGTCTCGT CTCAAATGAC ATCGTTTGCG CAAGAAATGC AGTTTCAGCA GCAACTGGAA TTGCATAACA GTAGCCAGTT ACTAAGAAAC CAGCAAGAAC AGTCCTCTCT GCATTCATTA GAACAAAATC TGTCCCAAAA TCCTCAGCAA CTCCAAATGC AACAACAATC ATCAAAACCA AGTCCGTCAC AACAGCTTCA GTTGCAGCTA CTGCAGAAGC TACAGCAGCA GCAACAGCAG CAGTCGGTTC CTCCAGTAAG CTCATCCTTA CAGCCACAAT TATCCGTGTT GCAGCAGACA CAAAGCCATC AATTGCAACA ACTTCTGTCA TCGCAGAATC AACAGCCCTT GGCACATGGT AATAACAGCT TCTCAGCTTC AACTTTCATG CAGCCTCCAC AGTTTCAGGT GAGTCATCAG CAGCAAGAAC AGATGAACAA CAAAAATCTA GTAGCCGCCG GACAATCACA TTCTGGTCAC ACAGATGGAG AAGCTCCTTC GTGTTCAACC TCACCTTCCG CCAATAACAC CGGACATGAT AATGTTTCAC CGACGAATTT CCTGAGCAGA AATCAACAAC AAGGACAAGC TGCATCTGTA TCTGCATCTG ATTCAGTCTT TGATCGTGCA AGCAATCCGG TCCAAGAGCA TTATACAAAA ACCGAGAGCC GGTTCAATCA AGGCATGGTA AATTTGAAGA GTGGTGGTGA ACAGTTCAGA TTTAAAGGTG CGGTAACAGA TCAAATCGAT GTATCCACAG CGGGAGCGAC GTATTGTCCT GATGTTGTTG GCCCTGCACA GCAGCAACAG ACTTTCCCAC TACCATCATT TGGTTTTGAT GGAGACTGCC AATCTCATCA TCCAAGAAAC AACTTAGCTT TCCCTGGTAA TCTCGAAGCC GTAACCTCTG ACGCTCTCTA TTCTCAAAAG GACTTTCAAA ACTTGGTTCC CAACTATGGC AACGCACCAA GAGACATTGA GACGGAGCTA TCCAGTGCTG CAATCAGTTC TCAGTCATTT GGTATTCCCA GCATTCCCTT TAAGTCCGGA TGTTCAAATG AGGTTGGTGG CATCAATGAT TCCGGCATCA TGAATGGTGG AGGACTGTGG CCCAATCAGA CTCAACGAAT GCGAACATAT ACAAAGGTTC AAAAACGAGG ATCAGTAGGA AGATCAATAG ATGTTACCCG TTATAGCGGC TATGATGAAC TTAGGCATGA CTTAGCAAGA ATGTTTGGCA TCGAAGGACA GCTTGAAGAT CCGCTAACCT CTGACTGGAA ACTCGTATAC ACCGATCACG AAAACGATAT TTTACTCGTT GGTGATGATC CTTGGGAAGA GTTTGTGAAC TGCGTGCAGA ACATAAAGAT ACTATCATCA GCAGAAGTCC AGCAAATGAG CTTAGACGGA GATCTTGCAG CTATCCCAAC CACAAACCAA GCCTGCAGCG AAACAGACAG CGGAAATGCT TGGAAAGTAC ACTATGAAGA CACTTCTGCT GCAGCTTCAT TCAACAGATA G |
| Length | 3291 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_1: 7719247.. 7723572 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT1G19220.1 |
| Description | auxin response factor 19 |
| TAIR curator summary | Encodes an auxin response factor that contains the conserved VP1-B3 DNA-binding domain at its N-terminus and the Aux/IAA-like domains III and IV present in most ARFs at its C-terminus. The protein interacts with IAA1 (yeast two hybrid) and other auxin response elements such as ER7 and ER9 (yeast one hybrid). ARF19 protein can complement many aspects of the arf7 mutant phenotype and , together with ARF7, is involved in the response to ethylene. In the arf7 arf19 double mutant, several auxin-responsive genes (e.g. IAA5, LBD16, LBD29 and LBD33) are no longer upregulated by auxin. |
| Alias | [ARF11][ARF19][IAA22][AUXIN RESPONSE FACTOR11][auxin response factor 19][indole-3-acetic acid inducible 22] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 3.4641 |
Ahg495205 | Tetratricopeptide repeat (TPR)-like superfamily protein |
| 9.79796 |
Ahg491737 | villin 4 |
| 10.7238 |
Ahg481406 | DNAJ heat shock N-terminal domain-containing protein |
| 19.1833 |
Ahg949661 | Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein |
| 20.2731 |
Ahg928964 | Ubiquitin-conjugating enzyme/RWD-like protein |
| 26.533 |
Ahg494424 | protein dimerizations |
| 31.8434 |
Ahg950645 | myosin heavy chain-related |
| 33.0151 |
Ahg889261 | Myosin family protein with Dil domain |
| 40.9878 |
Ahg495592 | SWAP (Suppressor-of-White-APricot)/surp domain-containing protein |
| 49.1121 |
Ahg470333 | Protein of unknown function (DUF789) |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
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