Detail



ID : Ahg335722

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|335722|fgenesh1_pg.C_scaffold_1002287
Sequence
ATGTTTATAA CGGAAAAACA AGTTTGGATG GATGAGATCG CCGCAAGAAG AGCTTCTTCT TCTTGGGATT TCCCTTTCAA CGACAATAAC ATTCATCGTC GTCATTGCAA CACAAGTCAT GAGTTTGAAA TCTTGAAGAG CCCTTCTGGA GATGTAGCGG CTAACGAAGA AGAGAGTAAT AATCATAACC CTAATTTCAG TAACAGCGAG AGTGGTAAGA AGGAGACAAC AGATAGTGGT CAGTCTTGGT CTTCTTCATC TTCAAAACCG TCAGTCTTGG GGAGAGGACA TTGGAGACCA GCTGAAGATG TTAAACTCAA AGAGCTTGTC TCCATTTACG GTCCACAGAA CTGGAACCTC ATAGCTGAAA AGCTTCAAGG AAGATCTGGA AAAAGCTGTA GACTACGATG GTTTAACCAA TTGGACCCGA GGATAAACCG AAGAGCTTTC ACGGAGGAAG AAGAGGAGAG GCTGATGCAA GCACATAGGC TTTATGGTAA CAAATGGGCA ATGATTGCGA GGCTTTTCCC TGGAAGGACG GATAATTCTG TCAAGAACCA TTGGCATGTT GTCATGGCTC CTAAGTATAG AGAACACTCT TCTGCTTATC GTAGGAGGAA GCTTATGAGT AATAATCCAC TTAAACCTCA TCTCACTGAT AATCATCATC CTAACCCTAA CCCTAATTAC CACTCTTTTA TCTCCACTAA TCATTACTTC GCTCAGCCTT TCCCCGAGTT TAATTTGACT CATCACCTGG TTAATAATGC CCCTATCACG AGTGACCATA ACCAGCTTGT TTTGCCTTTC CATTGCTTTC AAGGTTATGA GAGCAATGAA CCTCCGATGG TTGTGAGTAT GTTTGGCAAC CAAATGATGG TCGGCGATAA TGTAGGTGAC ACGTCAGACG CGTTATGCAA TTTTCCGTAC ATTGACCCTA GGAGCCAAGA GAAAGCGGAA CCAAATGAAG CAATGCATTT GATCGGAATG GAAGCGGTAG ATGAGGAGGT GGTCGAGAAG GCTAAGCAGC AACCACATTT TTTCGATTTT CTTGGCTTGG GGACTGCGTG A 
Length1071
Protein Sequence
Protein Residue
Map Locationscaffold_1: 10621956.. 10623330
Download Sequence
A.thaliana
AGI-codeAT1G26780.2
Descriptionmyb domain protein 117
TAIR curator summaryEncodes LOF1 (LATERAL ORGAN FUSION1), a MYB-domain transcription factor expressed in organ boundaries. Functions in boundary specification, meristem initiation and maintenance, and organ patterning. Also see LOF2 (At1g69560).
Alias[AtMYB117][LOF1][MYB117][myb domain protein 117][LATERAL ORGAN FUSION 1]
Gene coexpression
MR
MR Locus Description
7.48331 Ahg359210
14.4222 Ahg931891
22.8473 Ahg949333 C2H2-like zinc finger protein
28.5132 Ahg942338
31.1127 Ahg938914 MATE efflux family protein
33.1662 Ahg355592
33.7639 Ahg943267 fatty acid desaturase family protein
35.0999 Ahg470991 respiratory burst oxidase homolog B
37.229 Ahg906590 Cysteine/Histidine-rich C1 domain family protein
39.3446 Ahg899422 Bifunctional dihydrofolate reductase/thymidylate synthase
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression