Detail



ID : Ahg336990

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|336990|fgenesh1_pg.C_scaffold_1003555
Sequence
ATGCGGGAAG ACATCCCAAC TAAACCTGGA TTCACAGATC AAATTCCGGC AGATTTCGCT ACCGCACCTG TTCTTCAGTA CTTAAATCTC TCTACCAATT CCTTCCACAG CAAATTACCG GCAAACATAT GGAAAGCACC GAATCTACAG ATCTTCTCAG CGAGTTTCAG CAATTTGATC GGTGAAATCC CAAATTACGT TGGTTGCAAA AGCTTCTACA GTATTGAGCT ACAAGGAAAC TCACTCAACG GAACGATTCC ATGGGACATC GGACATTGCG AGAAGCTTCT CTGTTTGAAT CTCAGTCAAA ATCATCTCTC CGGAATCATT CCATGGGAGA TTTCAACGCT TCCGTCAATC GCCGACGTAG ATCTTTCTCA TAATCTATTA ACCGGAACAA TCCCTTCCGA TTTTGGAAGC CCCAAGACAA TCACAACCTT CAACGTTTCG TATAATCAGC TTATCGGTCC AGTTCCAAGT TGTTCGTTAG CGCATCTGAA TCCGTCGTTT TTCGCCTCAA ACGAAGGTCT CTGCGGAGAT GTCATCGGAA AACCTTGCAA TTCTGATAGG TTTAACACCG GAGATTCAGA TCTAGACGGT CATCATAACG AGGAACGACC GAAGAAAACC GCCGGAGCTA TTGTTTGGAT TTTGGCGGCG GCGATTGGGG TTGGATTCTT CGTCCTTGTA GCCGCTACTC GATGTTTCCT GAAAAGCTAC GGAAACAGAG TCGACGGTGG TGGAAGAAAC GGCGGAGATA TAGGACCAGA AAACGAAAAT GACTACTACT CGACAATATA A 
Length801
Protein Sequence
Protein Residue
Map Locationscaffold_1: 23683819.. 23685859
Download Sequence
A.thaliana
AGI-codeAT5G61480.1
DescriptionLeucine-rich repeat protein kinase family protein
TAIR curator summary
Alias[PXY][TDR][PHLOEM INTERCALATED WITH XYLEM][TDIF receptor]
Gene coexpression
MR
MR Locus Description
38.5616 Ahg901152 plasmodesmata-located protein 3
57.3585 Ahg476914 thylakoidal ascorbate peroxidase
70.993 Ahg929671
83.7078 Ahg470362 FASCICLIN-like arabinoogalactan 9
86.209 Ahg941132 chloroplastic acetylcoenzyme A carboxylase 1
89.3029 Ahg490872 arabinogalactan protein 18
94.361 Ahg480225 xyloglucan endotransglucosylase/hydrolase 4
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression