Detail



ID : Ahg337498

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|337498|fgenesh1_pg.C_scaffold_1004063
Sequence
ATGAAAAACG TGGAGCAGCA TTTCTCAGAG GATCTATTGA TCACACAATC TTCCAACGCG GTAAGAAATT ACTCATACCT AATCCCATTT GAGATTCTTA TCGATATATT CTCGAGAGTT CCCGCAAGGT CTATAGCTAG GTTTCGTTGC GTATCGAAAT TATGGGAATC CATACTAGGT AGTCCTGATT TCACAGAGCT GTTCCTGACT AAGTCTGTAG CTCGTCCACG GCTCTTGTTT GCTTTGGAAG TTGGTAAAGA GTTATTCGTC TTTTCTTCAC CTCAACCTCA AAATCCAGAT GAGAACTCGT CTCTTGTAGC CACCCCTTAT AAGTATTTTC CCAAAGATTT TCCAATCAAT ATATGTCCCC CGCTCAATGG ATTGGTATTT CTTCAGGATT TGAAACGAAA ACTGCAGGTG GTTTATAACC CCGTTACGGG AGAGTCCATA ACCTTACCCG AAGTGACAGC AACTACAAGT TTTAAAAGAA GCTATTTTAG TTTTGATCCG ATCAGCAAAA AGTGGAAAGT CTTGTATATG GAATGGTCAC GTGATGGAAC ACCCAAATCT ACTTACGTTT TGACATTGAA GACTGGAAAA TGTTTATGGA GGAAGATCCA AGACCCAGTA TTTCCCCATA CTCCTAGATG TGATGAAATA TGCATAAATG GAGTTTTGTA TTACGGAGCT TCCGCTAAAG GATATTATAG CTATAAGATA GTATGCTTCG ACTTTAGGTT TGAGAAATTC GGCCGTATTA AGATAAATGG AGATCATACG TGGACTTTGT TTAACTGCAA AGGTAAATTA GGTGCACATC AGTATAACCT TTGGGGTTAC GAAAAACTTA CGTTGTGGGT TTTAGAAGAT GCTGGAAAAC ATCAATGGTC TAAGAGTATA TGCATACTGC CATCCATAGT CTACAAGAAG AACATGATTG TCGGAATGAC TAGTAGCGGA GAGCTTGTGT TTACGCCATA CGCATGCTAT CTATCAAACA TTTTCTTCTA CAATATCGAG AGGAAGACTT ATACAAGAGT CAATATTAAG GGATTTGAAG AGTTTAACCA TCAATTTACT TTGGTTCACA CCTTTCTAGA CTTTGTAGAG AATATTAACT TTATCAACAT AGATGGCATG TTCGATGTGT ATAATAATTG GACTTTGTTC AACTGCAAAG GTAAATTAGG TTTACATTAC TATGCAGCTT GGTATAGACA AGAAGAAGAA CTTGTGTTGT ATGTTCTAGA AGATGCTGGA AAACATAAAT GGTCCAAAAG TATATGCATA CTCCCACCTA TAGTCCACAA CAACAATATT GTTGGAATGA CTTGTACGGA GAGATTGTGT TTTCGCCGTA CCCATGCTAT CTACCAAGCA CTTTCTGCAT TTTCTTCTAC AACATGGAGA GGAAGACTTG TACAAGAGTC AATATTAAGG GATTTGAAGA GTTTAAGCAT CACTTTACTT TCCCTTACAC CTTTCTAG 
Length1488
Protein Sequence
Protein Residue
Map Locationscaffold_1: 27103307.. 27105367
Download Sequence
A.thaliana
AGI-codeAT1G53360.1
DescriptionF-box associated ubiquitination effector family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
4.24264 Ahg338391
5.65685 Ahg919827
11.225 Virus2944
11.225 Ahg930245
21.9089 Ahg353622
24.3311 Ahg914379 Aquaporin-like superfamily protein
25.219 Ahg359456
33.4664 Ahg929871 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein
37 Ahg315818 annexin 5
45.4973 Ahg470551 Protein of unknown function (DUF1264)
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression