Detail


ID : Ahg338097

Blast(Query):  A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|338097|fgenesh1_pg.C_scaffold_2000196
Sequence
ATGGAGGAAG AAAACCGTGG AGAAATTAAA GTGTTTTTAT CTTCCTGGAT CTATATCACA GATAGTTCTT CATGCAGCCC CTGGATACGA ACATCTTCCA AAGCCTGCAG TTTTGTTTTT GAAGAACAAG ACCAGCTGTC AGATTTAGAC AGACAAAGAG AGGCCGCAGC TGTTTTAGAT GATTCTCGGG AATCATCTGA AACAGTGGAT GACGATGGCT CCTCTGATTA TGACTCTGAA TCTTCTATTG ATTCAGATTG CAGCAGTGAC GGTGATGAAA GAACAGTGTC TAATGGTGTC AATGATCCAG GTGCTCCTTT AATTCAAATT TCTGTGACTT CGGTTTTCAA TGACCCAGAA GATTAA
Length366
Protein Sequence
Protein Residue
Map Locationscaffold_2: 1303447.. 1304447
Download Sequence
A.thaliana
AGI-codeAT3G55480.2
Descriptionprotein affected trafficking 2
TAIR curator summary
Alias[AP-3 beta][PAT2][WAT1][beta-subunit of adaptor protein complex 3][protein affected trafficking 2][WEAK ACID TOLERANT 1]
Gene coexpression
MR
MR Locus Description
7.07107 Ahg359335 Ubiquitin-like superfamily protein
8.88819 Ahg945487
10.5357 Ahg348420 SAUR-like auxin-responsive protein family
16.7033 Ahg485059
19.0526 Ahg902383 Concanavalin A-like lectin protein kinase family protein
20.445 Virus0492
20.5913 Ahg936218
20.8327 Ahg932132 cytochrome P450, family 96, subfamily A, polypeptide 5
20.9762 Virus1073
22.2711 Ahg950347
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression