Detail



ID : Ahg339498

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|339498|fgenesh1_pg.C_scaffold_2001597
Sequence
ATGAATAAGA AAGATTCAGC TACTCATTCC ACTTTGCCAT ACCTTAATAC TAGCATCTCT TGGGGAGTGG TTCCAACTGA TTCCATTGTT AATCGTCGCG TTACTACTAC TGAATCATCA CTAAGCTTGA AGATGGATGC AAGGCCTGAA CTTTTACAAA CCACTAAGCA AATCAGTTTT CAGGACCAGG ATTCATCTTC AACGCAGTCC ACTGGCCAAT CTTATACTGA AGTTGCTAGT AGTGAAGATG ATAATCCTTC CAGACAAATC TCGTTTTCTG CTAAATCAGG ATCTGAAGTA ACTCAACGGA AGGGGTTTGC AAGTAATCCT AAACCAGGCT TGATGACAGG ATTTCCGAAT ATTCACTTTG CTCCTGCACA GGCTAATTTC TCATTTCACT ATGCTGATCC ACATTATGGT GGTTTATTAG CTGCTACTTA CCTACCACAG GCACCGACAT GCAATCCCCA AATGATGAGT ATGATTCCTG GTCGTGTTCC TTTACCAGCG GAGCTCACTG AAACTGAGCC AGTCTTTGTC AATGCGAAGC AATACCACGC AATTATGAGG AGGAGACAGC AACGTGCTAA GCTCGAGGCT CAAAACAAAC TAATCAGAGC CCGTAAACCT TATCTTCATG AGTCGCGACA TGTTCATGCT CTTAAAAGGC CAAGAGGATC CGGTGGAAGA TTCCTAAACA CCAAAAAACT TCTTCAAGAA GCCGAACAAG CTGCTAGAGA ACAAGAAAAT GACAAGTCGG ACCAACAGGA AAACAGAAAG ACAAACATGT CTAGATTCGA AGCTCATATG CTGCACAGCA AAGACCGTGG TTCAACCACT TCTGGCTCTG ACATCACCTC TATTTCCGAC GGTGCTGATA TCTTTGGACA CACTGAATTC CAGTTTTCAG GTTTCCCAAA TCCGACAAAC CGAGCCATGC TTGTTCATGG TCAGTCTAAT GACATGCATG GAGGTGGAGA CATGCACCAT TTCTCTGTCC ATATCTGA 
Length1008
Protein Sequence
Protein Residue
Map Locationscaffold_2: 14661400.. 14662795
Download Sequence
A.thaliana
AGI-codeAT1G72830.2
Descriptionnuclear factor Y, subunit A3
TAIR curator summaryEncodes a subunit of CCAAT-binding complex, binds to CCAAT box motif present in some plant promoter sequences. One of three members of this class (HAP2A, HAP2B, HAP2C), it is expressed in vegetative and reproductive tissues.
Alias[ATHAP2C][HAP2C][NF-YA3]["nuclear factor Y, subunit A3"]
Gene coexpression
MR
MR Locus Description
17.4929 Ahg490986
20.2978 Ahg488679
20.6155 Ahg491934 ADP/ATP carrier 3
28.6356 Ahg494088 Thioredoxin superfamily protein
32.8634 Ahg934962 Galactose oxidase/kelch repeat superfamily protein
36.6742 Ahg923664 syntaxin of plants 81
42.4264 Ahg928710 SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein
43.1972 Ahg934176
46.2817 Ahg935637 transducin family protein / WD-40 repeat family protein
49.2747 Ahg943129 Copper amine oxidase family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression