Detail



ID : Ahg340916

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|340916|fgenesh1_pg.C_scaffold_3000679
Sequence
ATGAATCCTC ATCCATATTC TGCAAAACAG GTGGGGGATG AATTTGCAAG GCAATACTAT CAGACCTTGC AAAACTCCCC GGAAAATATC TATCTGCTTT ATAAAGACAA CAGTAAGATT TCACGGCCTG GACTCGATGG AACGATGCGT GTCTTCACTT TATCGGATGT GGATGAGAAT GATCTTAAAA TGCAATCTTC TGGTGGTTTT GATTCGGTTG AGGTAACCAG TGTCACGTCC CAAGACTCTC ATGAGAAGGG TATTGTCGTC GCTGTTTATG GCTACTTCAC TTTCAACGAG AGACCAGCAA GGAACTTCAC ACAAAGTTTC TTTCTTGCTC CCCAAGAAAA AGGCTACTTT GTTTTGACCG ACATGTTCAA GTTTGTTGAT ATACCCGAGG CTAATGATGT CATAGAGGAG AAAGTTCCAG AAACAGAGGA AGCTGCACTG AGAGTTTCTG AAAATGTCCC CAAGCTATCT TATGCCTCTG TTGTGATGAA GGAAATACGA ATAGGTCAAG GTCAACATTT TTCGTCTTGT GATTATTCTC CAGAGATAAA ACCTATAAAT GGGAACAGTC GGGAGTCTCA AATGGTATCT GAGGGTGCAG CCATTTGTGT GAAAAATCTT CCTCTAAATG CAACCATTGC CTTGGTTAAG AATGCACTTA AGCAGTTTGG GGAAATTAGA AGAGGTGGAG TTAAAGTTAG AAGCACAAAG TACTATGAAG GGAAATATGC TTATGTGGAG TTTGAGGAAG CAGATGCCGC CAACAGGGCA ATAATGGCGT CTCCTCTAAG TATTGATGGG TACAGAATTT ACTTGGAGAA GAAGCAACCT TACTACAAAA AATCAGGTCA ACACTCTTCG TCTTGTGATC ATTCTACAGA TATAAAAGCT GATGCAGGTG ATGATACTGG AAATGGGAAC AGTCAGGAGT CTCAAGGTAA AAAATTTGAG GAAGCTGGAG GCATTTGTGT TCAAAACCTT CCTCCAAATG CAACCATTGC CTTGGTTGAG AGGGTATTTA AGCAGTTTGG ACAAATTAAA AAGGGACGAA TTCAAGTTAG AAACCCTGCT AAGTCGAACT ATTGGTATGC TTTTGTGGAG TTTGAGGAAG CAGATGCTGC CGAGAGGGCA ATAAAGGCGT CTCCTCTAAA TATTGATGGG TATACAACTG ACGTGGAGAA GAAGCTACCT TACTATAAAA GTGAGTATGT GGGAGAATCA GGCCGTTACT GTGAAAGCCC ATTCGCTGGA CCAGGAAACA TACACAGAGG CGAGGGAGTG AGAGGATCAC TAGGTAACCC CTTTTGTAAC CGGCAGAAGA TGATGGAGGA AGTGAGAGGA ATAGACGTAA GGCAGAAGTT AATGATGGGA TCGAGAGGAG CAGAAGTTTA TGACTTGCAC AAATGGCAAA AGATTATGGA TCAATCGGAG GAGCAGATGA AGTTTCAGGA GGAAGAAGGA CGACAACACA ATCAAAACAG ATATAGAAGC GAGGAAGTGA GAGGAACAGA AGGAGTTGTT GGTCTGGAGG CAGAAGAGAA CCAAAACTGG GAGAAGTTAA CGGAGGAACA GAGGAAGATT CAGGAGGAAG AAGGGCGACA ATACAATCAA AACAGATATA CAAGGGAGAA AACGAAAGAA ACAGGAGGAG TTGGTGAAGA AGTGAGAGGA ACAGAAGCTC ACGAAGCTAA TAATGCGAGT AAGCTTCAGG AGGAAGCGGG ACAAACAGAA GTTGTTCATT CTTGGGACTA TGAGCAGATA ATGGAGGAAC ATAGGAAGTT TCTGGAGGAA CAAGAAGAGG AATCAAAACT GAACCTGACT AGTTATGTAG AAGATATTGA GGCTTTTTAT TTGGGTGTTT TATGA 
Length1875
Protein Sequence
Protein Residue
Map Locationscaffold_3: 2857416.. 2863213
Download Sequence
A.thaliana
AGI-codeAT3G07250.1
Descriptionnuclear transport factor 2 (NTF2) family protein / RNA recognition motif (RRM)-containing protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
6.7082 Ahg916649
9.74679 Ahg897564 HXXXD-type acyl-transferase family protein
11.4018 Ahg318113
16.4317 Ahg933307
17.6635 Ahg945083 Galactose oxidase/kelch repeat superfamily protein
22.1811 Ahg938128
26.4386 Ahg915037
30 Ahg484455 AP2/B3-like transcriptional factor family protein
39 Ahg900378
47.1381 Ahg337030 PLAC8 family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression