Detail



ID : Ahg342532

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|342532|fgenesh1_pg.C_scaffold_3002295
Sequence
ATGACATTCT GCAACAAACT TAGCGGTATT TTGAGACAAG GGGTTTCTCA GAGCTCAAAT GTTCCAGTGA CATCTATGCT TGGCTCTCTT CGTTACATGT CCACTAAGCT TTTTGTTGGT GGTCTCTCTT GGGGAACTGA TGACAGCTCC TTAAAGCAAG CTTTCTCTAA CTTTGGCGAA GTCACAGAAG GAGCTGAATC CATAGCATTG ATGGAGCTGA ACGGTAGGAA CATCCGCGTG AACCTTGCAA ATGAAAGACC GAGTGCCCCG AGATCATCGT TTGGTGGTGG TGGTGGTTAC GGTGGCGGAG GTGGCTACTA A 
Length321
Protein Sequence
Protein Residue
Map Locationscaffold_3: 10449750.. 10450740
Download Sequence
A.thaliana
AGI-codeAT3G23830.1
Descriptionglycine-rich RNA-binding protein 4
TAIR curator summaryencodes a glycine-rich RNA binding protein. Gene expression is induced by cold and reduced by ionic (salt) and non-ionic (mannitol) osmotic stress. Lines overexpressing the gene are slightly more tolerant to osmotic stress during germination.
Alias[AtGRP4][GR-RBP4][GRP4][glycine-rich RNA-binding protein 4]
Gene coexpression
MR
MR Locus Description
14.3178 Ahg496177 GTP binding Elongation factor Tu family protein
20.5913 Ahg478235 Ribosomal protein L10 family protein
24.4336 Ahg926602 40s ribosomal protein SA
27.7849 Ahg487065 Ribosomal protein L4/L1 family
32.9545 Ahg350051 glucan endo-1,3-beta-glucosidase-like protein 3
37.8286 Ahg474002 receptor for activated C kinase 1B
40.2492 Ahg476958 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein
40.2492 Ahg938554 rotamase cyclophilin 2
43.9886 Ahg472662 MLP-like protein 423
44.4972 Ahg492264 fibrillarin 2
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression