Detail



ID : Ahg343780

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|343780|fgenesh1_pg.C_scaffold_4000122
Sequence
ATGGAACAGA ATCTTTACCT AAAACGATCC CGTCCTCCTC CCTCCAACCC GACGGAGTTA CCGAGAACGT CGTCACGGAC TAATCTCTTC TCTCGTGGAA ACTCGATCGG ACGAGTTCGA GTCTCCTCTC GAGCTGTTCC TCTGGCGAAA CCTTCCGATT CGCCTTATTA CATTGGGTTG GAGAGAGTCA AGACGGATCC GTACGATCGG ATTAAGAACA CGGACGAGAT TATTCAGCTT GGATTAGCTG AGAGTACACT GTGCTTTGAC TTGCTACAGA GATGGATGTC TAAGAATTTG ATGGAGTCGA TGATGCAATC TGATGATGGT AAATTCGATA TTAGTAGTAT CGCAATGTAT AAACCTATTG AAGGATTACT GGAACTCAGA GATTCACCTA GAATCTCTTA TATGCATGGA TCTTCCACTA AGCTTGTCTC TTGTCTTATA ATCGCTCTTA GAAGAGCAAA GAGGAGGAAC ATGGAACGTT TGGTTTTGGC ATGTGGTGGA GAAGCTGTGA ACTCTGTTGA TGACTTGACC CTGATTCTTT TTGTTGGGCT GAGATTTTCA GTTCAGAGAA AGCAAAAGAC AAGCACCTAA 
Length600
Protein Sequence
Protein Residue
Map Locationscaffold_4: 768711.. 769694
Download Sequence
A.thaliana
AGI-codeAT5G51690.1
Description1-amino-cyclopropane-1-carboxylate synthase 12
TAIR curator summaryEncodes an aminotransferase with broad specificity for aspartate and aromatic amino aids such as tyrosine and phenylalanine. It does not act on branched chain amino acids and does not have ACC synthase activity.
Alias[ACS12][1-amino-cyclopropane-1-carboxylate synthase 12]
Gene coexpression
MR
MR Locus Description
4.79583 Virus3111
6.9282 Ahg949089
9.48683 Virus2942
10 Virus3066
12.7279 Ahg891934
18.735 Ahg493718 Family of unknown function (DUF577)
20.6155 Ahg936218
21.166 Ahg315023
27.5681 Virus1879
27.7489 Ahg907131
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression