Detail


ID : Ahg344684

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|344684|fgenesh1_pg.C_scaffold_4001026
Sequence
ATGATCTTCT TCTCTAAGCT TAGTCGCTCC ATTTCTCGTT CAAGGGGGTT TTTGTACGGT GGTGGTGTTA GATCGGCGGT GTTAAACGAG GCAAGGCTAC TTGCTTCGCC AGGTCTTGAG GCGGCGTCTG TGAATCAAGT GGAAGGTGGA TTAGGGTTTA TAAGAAGACA CTTTGCTTCT TTAGCTTCAC GGAAGGGTTT AGTCAATAAT GATTTGATTG GTGTTTTTGC TAATCCAAAG ATTCGTCGAT TCTTCTCTGA TGAAGCTCCT AAGAAGAAGA ATTATGAGAA CTATTTTCCT AAAGATACAA AGCAAGAACC CAAGAGTGAT CAGAAATCAG AGCATAAAGA GGGTTCAGAG AAGAATGAAA ATGAGAACGT GGGAGATATG TTCATGAATC GATTCCAAAA TTTGCTGATT CCTCTATTAG CTCTTGCTGT GTTCTTTTCT TCTTTCTCGT TTGGCTCTGG GGACCAACAA CAGGCAAATG TGGTTCTACT TATTAGTTTC CAGGAGTTCA AAAACAAGCT TCTCGAGCCA GGTCTAGTTG ACCACATAGA TGTTTTAAAC AAATCAGTAG CAAAAGTCTA TGTGAGGAGC TCACCGAAAG ACCAACAAAC AACTGACGTT GTCCATGGCA ATGGTAATGG TATACCTGCT AAAAGAACAG GTGGTCAGTA TAAGTACTAC TTCAATATCG GTAGTGTTGA TTCTTTTGAG GAGAAACTCG AAGAAGCTCA AGAAGCGCTA GGTGTTGATC GTCATGAATA TGTTCCTGTC ACATATGTCT CTGAAATGGT CTGGTATCAA GAGTTCATGA GGTTTGCACC GACTTTATTG CTCTTGGGTA CTCTTATCTA TGGGGCGAGA CGGATGCAAG GTGGATTGGG TGTAGGAGGA ACCGGCGGTA AGAATGGTCG TGGAATTTTC AATATAGGCA AAGCCACAAT AATAAGAGCG GATAAACATT CCAAGAATAA GATTTATTTT AAGGATGTTG CTGGATGTGA TGAGGCTAAA CAAGAAATTA TGGAGTTTGT ACATTTCCTT AAGAACCCAA AGAAGTATGA AGATTTGGGT GCTAAAATTC CGAAAGGGGC ACTTTTAGTC GGTCCGCCTG GAACCGGAAA GACCCTTTTA GCAAAAGCCA CAGCGGGAGA ATCGGGTGTG CCATTTCTGT CTATTTCTGG CTCAGATTTC ATGGAGATGT TTGTTGGTGT TGGGCCTTCG AGGGTGAGAC ATTTGTTCCA AGAGGCAAGA CAAGCTGCAC CGAGCATTAT ATTTATAGAT GAGATTGATG CGATTGGTCG GGCAAGAGGT CGTGGAGGTT TAGGCGGTAA CGATGAGCGT GAAAGCACTC TGAATCAGTT GCTAGTTGAA ATGGACGGTT TTGGTACAAC CGCTGGAGTT GTGGTTCTTG CTGGGACCAA CAGACCGGAT ATTTTGGATA AAGCTTTGTT AAGGCCTGGC CGTTTTGATC GCCAGATAAC CATTGATAAA CCTGATATTA AAGGGCGTGA TCAGATTTTC CAGATTTACT TGAAGAAGAT CAAACTTGAT CATGAGCCAT CATATTACTC TCAAAGGCTT GCGGCTCTCA CTCCCGGATT TGCTGGAGCT GACATTGCGA ATGTCTGTAA CGAAGCAGCT CTTATTGCTG CTAGACACGA AGGAGCAACG GTTACAATGG CACACTTTGA ATCTGCAATT GATCGTGTTA TTGGTGGTCT TGAGAAGAAA AACCGGGTGA TAAGCAAGTT GGAGCGACGT ACGGTTGCAT ATCATGAATC TGGGCATGCA GTTGTAGGAT GGTTCCTCGA ACATGCAGAG CCGTTGCTGA AAGTGACTAT TGTACCACGT GGCACAGCGG CTCTCGGATT TGCACAATAT GTTCCAAACG AAAACCTTCT CATGACCAAA GAGCAACTCT TTGACATGAC TTGCATGACC CTCGGTGGCC GTGCAGCTGA GCAGGTATTG ATAGGTAAAA TCTCAACGGG TGCGCAGAAC GATCTAGAGA AGGTGACAAA GATGACGTAT GCGCAAGTAG CTGTATACGG TTTCAGTGAC AAGGTTGGCC TGCTCTCGTT TCCCCCAAGG GATGATGGCT ACGACTTCTC TAAACCATAC AGCAACAAAA CAGGCGCTAT CATAGACGAA GAAGTTAGGG AATGGGTGGC CAAAGCTTAT GAGCGGACCG TAGAGCTGGT TGAGGAACAC AAAGAGAAAG TGGCTCAGAT CGCCGAGCTT TTACTAGAGA AAGAGGTGTT GCATCAGGAT GATCTCTTAA AAGTTTTAGG TGAACGTCCA TTTAAGTCCG CTGAGGTGAC TAATTATGAC CGGTTCAAGT CTGGGTTTGA GGAGACTGAG AAGGACTCAG CCCCCACGCC GACAGTGGAG CCTGTGGTAG ATGAAGGAGC TCCTCCTCCG CTTGAACCAC AGGTTATTCC GACGTAG
Length2457
Protein Sequence
Protein Residue
Map Locationscaffold_4: 12663546.. 12666879
Download Sequence
A.thaliana
AGI-codeAT2G29080.1
DescriptionFTSH protease 3
TAIR curator summaryencodes an FtsH protease that is localized to the mitochondrion
Alias[ftsh3][FTSH protease 3]
Gene coexpression
MR
MR Locus Description
4.47214 Ahg491854 regulatory particle AAA-ATPase 2A
6.16441 Ahg923204 DEA(D/H)-box RNA helicase family protein
6.7082 Ahg941263 phosphoglucosamine mutase family protein
7.2111 Ahg923455 P-loop containing nucleoside triphosphate hydrolases superfamily protein
8.48528 Ahg485358 casein kinase II, alpha chain 2
8.7178 Ahg485584 Dihydrolipoamide acetyltransferase, long form protein
13.9642 Ahg490783 Molecular chaperone Hsp40/DnaJ family protein
14.4914 Ahg492022 Eukaryotic release factor 1 (eRF1) family protein
18.8944 Ahg485989 delta 1-pyrroline-5-carboxylate synthase 2
22.2486 Ahg473277 Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression