Detail



ID : Ahg345526

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|345526|fgenesh1_pg.C_scaffold_4001868
Sequence
ATGAATTTGA ACCTAATCTT CAAATTGGAT CTTCTTGGAG AGGCTGAAGC TGCATTGTTG CCCTGTGAAG ATTATGTTGA AGATGTTCCT GGTGGTGCAG CTGGGCATTA TCTTCTTGGT CTTATATATA GATATTCTGG GAGGAACAAC AGTTCAATAC AACAGTTTAG GATGGCATTG TCATTTGATC CGTTGTGTTG GGAAGCATAT AGAGAACTTT GTAGTTTAGG TGCCGCTGAA GAATCCTCAA CAGTTTTCGG GAATGTTGCT TCCCAGCGTC TTCAGAAAAC TTGTGTAGAA CAAAGAATAA ACTTCTCAGA AGGAGCAACC ATAGACCAGC TTACAAAAGA TACAAGTTTA TCGCAAACAG AACACTTTCC AGGAGAGAAC CAACAAGATC TGAAAACTAA GCAGCAGCCT GGAGCAGATA TTCCGCCAGA TACTGACAGG CAACTTAATA CAAACGGATG GGATTTGTAC ACACCTTCTC AAGTGCTTTT ACAGGCTCCA GAAGAATCTG GGCGTCGCCG TAGTGCTAGA ATAGCAGCAA GGAAAAAGAT TCCTATGTCG CAGTCATTAG GAAAAGATCT CCATTGGTTA CATCTTTCAC CTTCTGAGTC AAACTGTGCA CCTTCTCTTT CCTCGGTGAT TGGAAAATGC AGAACCCAAA GCAGCAAGGA AGCTGTTCCT GATACTTTTA CTCTAAATGA TCCAGCAACG ACGTCAAGCC AGTCTGTAAA TGACATTGGA AGCTCTGTTG ATGACGAGGA AAAGTCAAAT CCTAGTGAAT CTTCCCTGGA TCGTTTCAGC CTCATTTCTG GAATTTCAGA AGTGCTAAAC CTTCTGAAAA TTCTTGGAGA TGGCCTCAGG CATTTACATA TGTACAACTG TCAGGAAGCT TTGGTGGTAT ATCAAAAGCT ATCTCAGAAA CAATACAATA CACACTGGGT TCTCTTGCAG GTTGGAAAAG CATATTTTGA GCTACAAGAC TACTTCAACG CTGACTCTGC CTTTACTCTT GCTCATCAAA AGTATCCTTA TGCTTTGGAA GGAATGGATA CGTACTCCAC TGTTCTTCAT CACCTGAAAG AAGAGATGAG GTTAGGCTAT CTGGCTCAGG AGCTGATTTC AGTTGACCGC CTATCTCCAG AATCCTGGTG TGCTGTTGGG AACTGTTACA GTTTGCGTAA GGATCATTAT ACTGCTCTCA AAATGTTTCG GAGAGCTATC CAACTGAATG AAAGATTCAC ATATGCGCAT ACCTTTTGTG GTCACGAGTA CAATTCTTTT CGATGCACCT TTTTGTTTGA GAAATCCGAG TTTGCGCAGC ATCAATTTCA ACTGGCTCTC CAAATAAATC CAAGATCTTC AGTCATCATG TGTTACTATG GAATTGCTTT GCATGAGTCA AAGAGGAACA ATGAGGCGTT GAGGATGATG GAGAAGGCTG TACTCACTGA TGCGAAGAAT CCGGTCGCGA AGTACTTCAA AGCTAATATA TTAAATAGTC TCGGTGATTA TCACAAAGCC CAGAAAGTTT TAGAAGAGCT CAAAGAATGT TTTCCTCAAG AGGGCAGTGT CCATGCGTTG CTTGGCAAAA CATACAATCA GCTAAAACAA TACGACAAAG CCCTGTTACA TTTCGGCATT GCTTTGGATT TAAGCTCTTC TCTATCTGAT GCTGTCAAGA TAAAGGCTTA CATGGAGAGG TTGATAGAGC GAGTCGAGCT GAAGACGGAG GAGAATTTGT AG 
Length1752
Protein Sequence
Protein Residue
Map Locationscaffold_4: 17241806.. 17245901
Download Sequence
A.thaliana
AGI-codeAT3G16320.1
DescriptionTetratricopeptide repeat (TPR)-like superfamily protein
TAIR curator summarySubunit in the anaphase-promoting complex. Role in gametogenesis, control of mitotic progression and cell differentiation during the entire life cycle.
Alias[CDC27a]
Gene coexpression
MR
MR Locus Description
4 Virus0702
4 Ahg947463 E3 ubiquitin ligase, putative
5.47723 Ahg933062 plastoglobulin 34kD
7.07107 Ahg903150 NAD(P)-binding Rossmann-fold superfamily protein
7.34847 Virus0851
18.735 Virus0638
22.1359 Ahg891032 histone H2A 4
30.6594 Virus0345
30.7571 Ahg932307
32.249 Virus0051
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression