Detail



ID : Ahg347223

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|347223|fgenesh1_pg.C_scaffold_5000615
Sequence
ATGGGGCCTT CTGCCCATCT TGTTTACGCT ATAGGAGTTA TCATCATGGC AACAATGGTT GCTGCATATG AGCCATACAC GGATAGCTCA TCACCACCAC CATATTCTGT ACCACTTCCT AAGGTAGAAT ACAAATCTCC TCCATTACCA GATGTTTACA GTTCTCCACC ACCACCATAT TACTCTCCAG CACCTAAAGT TGACTATAAA TCTCCTCCAC CACCCTATGT TTACAGTTCA CCACCACCAC CGCCATATTA CTCTCCGTCC CCTGTCGAAT ACAAGTCTCC TCCACCACCA TATGTTTATA ATTCCCCACC ACCACCAACA TACTATTCAC CATCTCCTAA AGTTGAGTAC AAGTCTCCTC CACCACCATA TGTCTACAGC TCCCCACCAC CACCATACTA CTCCCCATCT CCAAAGGTAG ACTACAAGTC TCCTCCACCA CCATATGTCT ACAGTTCTCC ACCACCACCA TACTACTCAC CATCTCCTAA AGTAGAGTAC AAATCTCCTC CACCACCGTA TGTCTACAGT TCGCCACCAC CACCATACTA TTCACCATCT CCTAAGGTAG AGTACAAATC TCCTCCACCA CCGTACGTCT ACAGTTCACC ACCACCACCA TACTACTCAC CTGCCCCTAA GGTAGAGTAC AAATCTCCTC CACCACCGTA CGTCTACAGT TCACCTCCTC CACCATACTA CTCACCTTCT CCTAAGATTG ACTACAAATC ACCACCACCA CCGTACGTCT ACAGTTCTCC TCCTCCACCA TACTACTCAC CTTCCCCTAA GGTTGATTAC AATTCACCTC CACCACCATA CGTTTACAGT TCACCTCCTC CACCATACTA CTCACCTTCC CCTAAGGTTG ACTACAAATC ACCTCCACCA CCATATGTCT ACAGCTCACC ACCACCACCA TACTACTCAC CTTCACCTAA GGTAGACTAC AAGTCTCCTC CACCACCATA TGTCTACAGT TCTCCACCAC CACCATCGTA CTCACCTTCT CCAAAAACTG AGTACTAA 
Length1038
Protein Sequence
Protein Residue
Map Locationscaffold_5: 4401380.. 4402419
Download Sequence
A.thaliana
AGI-codeAT3G28550.1
DescriptionProline-rich extensin-like family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
1 Ahg323992 hydroxyproline-rich glycoprotein
2 Ahg912232 Proline-rich extensin-like family protein
2.64575 Ahg314403 C2H2 type zinc finger transcription factor family
3 Ahg931786 proline-rich extensin-like family protein
3.4641 Ahg355525 transposable element gene
4 Ahg916456 proline-rich extensin-like family protein
4 Ahg942633 Proline-rich extensin-like family protein
4.47214 Ahg952614 transposable element gene
5.2915 Ahg473807 ECA1 gametogenesis related family protein
5.47723 Ahg475609 photosystem II reaction center protein H
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression