Detail



ID : Ahg348614

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|348614|fgenesh1_pg.C_scaffold_5002006
Sequence
ATGGTGGTTG TCACTCACAT CTCCACTTCC TTCCACCAAA TCTCTCCTTC CTTCTTCCAT CTCCGTCTTC GCAATCCCGC CTCGTCCCTT CCCAAACGTG GCGGAGGATA CGGTGGTATC GCTTTGTCAA TTCGAGCTTA CATAGAGAAA CCTAACTCCT TCTCCACCTT CGCTAACAAA GTCATCGGTT CGCTTCCGGT TATCGGACTC CTCGCTCGGA TTCTCAGCGA TGAAGGCGGC GTTGGAAGAG ATCTCGTCGA TTTCGCTGAG TTTAGGAAAC GAGTTGGGAA TAAATGCACT CCTGATGATT CTAGGGCTTT CTATGAGTTC CAACAGCGAC GAGGCAAGGC AGGAGAACCT TTGTATGTGC TTCTATGTTG TTGGGTTGCT GCAGTAGGTG CAGGGCTTCT CAAATCTGAA GAGATTCTTG AAGGTGTTAC CAGAGTTAGC ATTTCGAATG ATCTTGAGTT TGAAGAACAG AACTTCATTG CTTTGATGAC TGAAGCTAGA CAGAGAAGGG CAAAGTTGAA CATTGATGCG CCAATAATAC CAATGGAACT AAGAGTCGAA AAGGCTCTTG AAGGTATTTA TGCTTGTTGC TTTCGGAGAG GACTTATCGA AGAGGAGGAT GAGAAGCTTC TTCAAGTGAT GCTAATCGCA GTTTTCCCAT CGGTTGAGAA GTCTGAGATA GAGAGAATCA TCAAAGAGAA AGCGACAAGG GTTGCAGAAG GAGGAGAAGA AGAGAATGTC ATGGCGAAAC GGTTGCCCAA AGAAGCTATT CAAATGCAGA TGAAGGATCT TGAGTTCCTT CAACAACAAA ACATAGAATC TTAA 
Length834
Protein Sequence
Protein Residue
Map Locationscaffold_5: 16429217.. 16430396
Download Sequence
A.thaliana
AGI-codeAT3G55250.1
Description
TAIR curator summary
Alias[PDE329][PIGMENT DEFECTIVE 329]
Gene coexpression
MR
MR Locus Description
14.8661 Ahg488058 Rho GTPase activation protein (RhoGAP) with PH domain
20.1246 Ahg311317 Protein of unknown function (DUF1138)
24.1247 Ahg311903 ALBINA 1
29.4279 Ahg489681 ribosomal protein S1
42.2374 Ahg476802 Photosystem II reaction center PsbP family protein
46.3897 Ahg484575 ribosomal protein L12-C
47.6235 Ahg492454
49.6387 Ahg471925 Translation initiation factor 2, small GTP-binding protein
54.1295 Ahg495247 phosphoglucomutase
54.4977 Ahg477028 Ribosomal protein L13 family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression