| Annotation |
|---|
| Description | jgi|Araly1|349656|fgenesh1_pg.C_scaffold_6000249 |
| Sequence |
ATGGAATCGT CTGGTGTTGA AGTTAAGAAT GGCACACCAC TTCATATAGA TCCTGGGGTA GATATGCTCG TGCACATCTC ACAGGTTGCT TTGGGAGAGA ATAAGAGCAA TGTAACCGAA CCAATCCAGC TTTACGTGAC AGTTGGACAG GATAAGCTTC TCATTGGAAC GCTATCTCAT GAGAGGTTTC CTCAGCTGGC TACGGAGCTT GTGTTGGAAA GGAACTTTGC GCTGTCTCAT AGTTGGAAGA ATGGGAGCGT TTTCTTCTCT GGTTACAAAG TTGATGCATC TGATGATCCA TATCCTTTAT TCTTTGTTGA TGAATATCAT TTGGGGAATT GTTGTTTTAC TCTGTTTTTG ACTTCCTTGA CTCTCTATCT CACCGTGACT GATAATACGA CTGACGCTGA ACTTGAGGCT GCTGGTTACA GAGCTGCTCC GAAATCAGCT GCGAAACAGG TGAACTTTCA ATTGCCAAAT GAAGATGTCA AGGCCAAGCA AGATGATGAA GCTGATGATA GTGAAGAGGA GTCTTCAGAT GATGATGAGA ACTCTAACTC TGAAGACTCT GGAGATGAGG AGGTTGCGGC TGCAGTTGGC AGTGAGGAAG ATGATGAAGA TGACTCATCA GACGACGAAG AAGATGACTC ATCAGAGGAG GAGACCCCAA AGAAGCCTGA AGAACCCAAG AAGAGGTCTG CAGAAGCCAA CTCCTCCAAG AACCCTGCTT CCAACAAGAA GGCTAAGTTC GTAACTCCTC AGAAAACAGA GACAAAGAAA CCGCATGTCC ATGTTGCAAC TCCTCATCCA TCAAAACAGG GGGGTAAGAA TTCTGGTGGA AGCAGCATTG GAGAGAAATC GAAGCAGCAG CAGACACCAA AGTCTGCAGG AGCGTTTGGG TGCAAGTCGT GCAGCAGAAC CTTTACTTCG GAAATGGGAT TGCAGTCTCA CACAAAGGCC AAACACAGTG CAGCTGCTTG A |
| Length | 981 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_6: 1106854.. 1108500 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT5G03740.1 |
| Description | histone deacetylase 2C |
| TAIR curator summary | HD2-type histone deacetylase HDAC. Involved in the ABA and stress responses. Mediates transcriptional repression |
| Alias | [HD2C][HDT3][histone deacetylase 2C][HISTONE DEACETYLASE 3] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 6.32456 |
Ahg483634 | Translation elongation factor EFG/EF2 protein |
| 11.1355 |
Ahg482088 | Ribosomal protein S3 family protein |
| 12.7279 |
Ahg478852 | STRUBBELIG-receptor family 7 |
| 17.1464 |
Ahg483594 | mitochondrial acyl carrier protein 1 |
| 17.1464 |
Ahg471136 | SKP1-like 18 |
| 18.2483 |
Ahg935246 | Ribosomal L38e protein family |
| 18.8149 |
Ahg470426 | Ribosomal protein L14p/L23e family protein |
| 22.7156 |
Ahg495765 | histone acetyltransferase of the GNAT family 2 |
| 24.8193 |
Ahg482805 | ribosome biogenesis regulatory protein (RRS1) family protein |
| 25.5343 |
Ahg478282 | Ribosomal protein L4/L1 family |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|