Detail



ID : Ahg349657

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|349657|fgenesh1_pg.C_scaffold_6000250
Sequence
ATGGAAGTAT CCTTTGAACC TGAGGAGGAA GAAGAACGCC AAACCAGACA ATACATCGAT GTGGCAGACT CATCTAGGGT TTCACAGAAC GAGAGTGAGA ATCAAAGAAG GTCGTCAGAA AGTGTTTGTT CATCATCGTC TTCAGGATTG CAGGAGGATA AAGAATCATT ATGTTCGATC TGTATGGAAG TTTGGACCAA CGGTGGCGAA CATCAAGTCT CTTGTCTTCC CTGTGGACAC TTGTATGGAT TTTCTTGCAT CAACAAGTGG TTACAGCATC GACCAAGTTC AGGAAAGTGT CCTCAATGCA ACAGAGCATG TAGCTTGAAA GATGTCGTGA AAATTTACGG ATCAAAGAGA ATCGCACTTC TCGAAGAGAA GACTGCGAGT TTGAGTAACA AAGAAGCACA ATGGAGAGAA ATAGAAGCAG AGTTACGATT AGAAGTTAAT AATCTGAAGA AGAAGATCTA TCAAGAACGT CATGGACATG AACCCTCTTA CAGCTTTAAA CATAAGGGAG AAGTGTTAGT TAATGGTGGT CGTATATTCG ACATAGATGG TGGTAGACAG ATTCTGTTAT TAGCCCGTAG GCTCTCAGGC AGTGGTGGAA CGTTTGTACT TACGCAAATG AACTTACATT CGGGTGAGAT TGAAGATGAT ATTTTGTTGC CTCGTACCAC TAGAGCTATT AAAGATCTTC GTCTTTCCCC TCACAATAAC GGGCTTGCGG TATTTGGTAC TCTAGGGAAA AAGTTATCAG TCATAAGCTT GGATAGTCAC AACACTGTCT TATCTTATGA TCATCTACCA GCTGCACCTT GGTCTTGTTC TTGGGATCTC AACAATTGTC ACCATGTTTA TGCTGGACTA CAGAATGGAA TGGTTTTAGT ATTTGACATG CGTCAAACCA CAGGACCTTT GGCATCGTTG GCTGGCGTAA CAAGCAATCC GGTTCATAGT ATACACCATC TCTCTGCTAA TTCCACTCCA ACTTCTGATG TCCGTGCGCT CTTATCCGCT TCTTCCACGG GGCTGTGTCA GTGGAACATC AGTGGCAGTG AGGGATGGTC AACTTTGGTT TCTGTTACAA GAAACCTAGG AATTTGCATT GCCTCCTCGT ATTGTCCTCG CAGCAATCAT GTGGTTGCCT CTTATAAACG GAGAGTTGAA TCTTCTGAGG ATAGTAATGG TGTAGAAGGA TTTCATGTTT GTCTCAAGAA AAGAGGTGAT GGTTCTTATT CTCAGAAACA GTCATCCACA CAACCTATAG TAGATTCCAT CGGTTTGCCA AGAACAGAGA TTATAGACTT TGGCAAGGAA AGGTCACAAC TTTTTGCATC TTATGAAGAG TCCACTCGTG AGCTCATCTT GCAAGATCCT TGGTCTTTTG CTGTCTCTCA ACGCTTTGCA TTGTCAAGTC ATCTTCCGCT TCAAGACGTG AAATACGCTA ACCTCAATGG ATCAGGTCTG CTCGGTCTCT TAACCGATGA TAGATTGCAG TTTCTTAGAA GCGAATCGCC ATGA 
Length1524
Protein Sequence
Protein Residue
Map Locationscaffold_6: 1109229.. 1110780
Download Sequence
A.thaliana
AGI-codeAT5G03450.1
DescriptionTransducin/WD40 repeat-like superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
20.8806 Ahg491291 ROOT HAIR DEFECTIVE 6-LIKE 2
26.2488 Ahg900472 Cysteine/Histidine-rich C1 domain family protein
30.5941 Ahg951906 MATE efflux family protein
35.0286 Ahg491913 cruciferin 3
48.7852 Ahg948206
59.5315 Ahg942300
67.8822 Ahg951695 Protein of unknown function (DUF626)
69.1737 Ahg929451 F-box and associated interaction domains-containing protein
70.8237 Ahg936340
79.9375 Ahg947612
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression