Detail


ID : Ahg351538

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|351538|fgenesh1_pg.C_scaffold_6002131
Sequence
ATGTTGGAGC CGGCGGTAAA CGGAGCCAAG TTCGTGATTG ATGCAGCGGC TAAAGCCAAG TTCAAGCCCG TGGTTTTCAC GTCATCAATT GGTTTAGTTT ACATTAACCC TAACCGTGAC CCTAAAGCCA TAGTTGACGA AAACTGCTGG AGTGATCTTG ATTTCTGCAA AAATACTAAG AATTGGTATT GCTACGGGAA GATGGTGGTG GAACAATCGG CGTGGGAGAC GGCGAAGGAA AAAGGTGTAG ACTTGCTGTT TAACTTTCTA GCACATGACG ATGAGCAGTA TGTGTGGGAG TCCCAGGCCG GTGGGTCTTT CACTGTGACC AGAGACACCT CTGGGGAGGC TCTTGGTAGA GGAACAAAGA TGGTCCTTTA CCTCAAGGAA GACCAGTTGG TGACAGGTGA GGAAGCTATT AAAACAGCCT TAGGGGAAAT GGATTCAACC AAAGAATCTT TACTATTCTG GAAAGACCAT TCAAAATTTG ATGTTGGAAC ATCTTTGTTA ACCAAGTTTT TAATGCATTC AACAGATGAA TTTTCCTATT AA
Length552
Protein Sequence
Protein Residue
Map Locationscaffold_6: 10619679.. 10620600
Download Sequence
A.thaliana
AGI-codeAT1G80820.1
Descriptioncinnamoyl coa reductase
TAIR curator summaryEncodes an cinnamoyl CoA reductase isoform. Involved in lignin biosynthesis.
Alias[ATCCR2][CCR2][cinnamoyl coa reductase]
Gene coexpression
MR
MR Locus Description
2.82843 Ahg495688 heat shock protein 81-3
8.94427 Ahg495683 HEAT SHOCK PROTEIN 81.4
14.4222 Ahg316086 Chaperone DnaJ-domain superfamily protein
19.4936 Ahg474793 Chaperone DnaJ-domain superfamily protein
22.1811 Ahg475836 Rubber elongation factor protein (REF)
25.5147 Ahg920308 RING/U-box superfamily protein
31.6544 Ahg485209
38.1576 Ahg475488 Major facilitator superfamily protein
40.8901 Ahg932721
43.3705 Ahg939699
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression