Detail



ID : Ahg351609

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|351609|fgenesh1_pg.C_scaffold_6002202
Sequence
ATGAGATTGT TCTTAGTGTT TGCGATTCTG TGGGGCTTAT TTTATAATGT AGCCTATGGG AAAGGTTCTT TAGATATTGA TATGAAACTG AAGGCTCTTA ATAAGCCTGC GTTGAAGACC ATCAAGAGCG AAGATGGAGA TATAATAGAT TGTATAGACA TCTATAAACA ACATGCCTTT GATCATCCGG CTTTAAGGAA CCACAAAATT CAGATGAAAC CAAGTATAGA ATTTGGTACA AAGAAGACTA CTATACCAAA CAACGGTTCT TCTGAACTAA TTACGTCTCA GATTTGGTCC AAATCCGGAA ACTGTCCCAA AGGGACAATA CCGGTTCGTA GAGTTAGTAG AGAAGACATA AGCAGAGCCT CTTCACCGTC TCATTTTGGG AGAAAAACTC CACACAGATA TAGCTTTCTC GACAAGGCAC TTCAACACAA GGGTAATTTC AATATAACAG CTGAAAAAAT AACTCATGCC CGCCCAAAGC TTCGATCGGA GGCAGTCCTT ATCGCCTTAG GGTTTAATTT TATTGGAGCT CAATCCGATA TAAATGTATG GAACCCTCCG AGGGTTCAGG CTAGCGATTA CAGCTCTGCT CAGATATGGC TTCTTGGTGG CCTCTCAGAT ACTTTTGAAA GCATAGAAGC TGGTTGGGCG GTGAATCCAC GCGTTTTCGG AGACTCCCGC ACACGTCTCT TCACTTATTG GACTAAAGAT GGATACACTA AAACAGGGTG CGTCAACCTC TTATGCGCGG GTTTTGTGCA AACAACTACT AAGTTAGCCT TGGGTGCAGC AATAGAACCT GTTTCGACTA CCTCGCAAAA ACAACATTAC ATCACCGTCA GCATGTTCTT GGATCCAAAC AGCGGGAATT GGTGGTTGAC TTGTGCAAAA AACGTAATAG GTTATTGGCC GGGGACACTC TTCACCTACC TTAAACATAG CGCAACCGCT GTGCAGTGGG GTGGAGAAGT GCATAGCCCT AACGTGGGGA AGAAGCCACA TACGAGAACT TCAATGGGGA GTGGACAATG GGCATCTTAC CTCTGGGCCC AAGCTTGTTA CCACACCAAC ATTAGGATCA AGGACTATTC CATGCAGATC AAATATCCCA CATATCTCTC CGAGTACGCT GATGAGTACG ACTGTTATTC GACAAAGCTC CACCGGAAAA CATATATGTC AGAGCCCCAT TTTTACTTTG GAGGACCTGG CCAAAATTCT CGTTGTCCTT AA 
Length1242
Protein Sequence
Protein Residue
Map Locationscaffold_6: 11075752.. 11078025
Download Sequence
A.thaliana
AGI-codeAT5G25950.1
DescriptionProtein of Unknown Function (DUF239)
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
1 Ahg316947 Pectin lyase-like superfamily protein
1.41421 Ahg921560 FBD, F-box and Leucine Rich Repeat domains containing protein
1.73205 Ahg323966
2 Ahg351608 Protein of Unknown Function (DUF239)
2.23607 Ahg481664 transposable element gene
2.44949 Ahg484914 transposable element gene
2.64575 Ahg355720
3 Ahg945592
3.74166 Ahg950935 Protein of unknown function (DUF1216)
3.87298 Ahg479634 F-box and associated interaction domains-containing protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression