Detail



ID : Ahg352355

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|352355|fgenesh1_pg.C_scaffold_6002948
Sequence
ATGCTTGAGA AACAACCTCT AGAGTTCCAT CGTTCAGTTT CTTTAGTTCA ACTCTTGTCT CAGTTATACC AAGGTAGCTA CCGAGAATTT AACAAAAAGG TTCTAGAAAT AATCCAGGGG CATAGACGCC ATGAAACTAA GCGAAATCCC TTTTCCAGGG CGGATCGTAT GGCACAACTT TTGGATGAAC GAGATCTTGG TGTCTTGGCG TCTTCTACGA GTCTTCTTGT AGCTCTGGTA TCTAATAATC ATGAGGCGTA CTCAAGTTGT CTACCTAAAT ATGTCAAAAT ATTAGAACGC CTTGCTAGGA ACCAGGATGT TCCTCAGGAG TACACATACT CTGGCATCCC ATCTCCTTGG CTCCAGGTTA AGGCAATGAG GGCTCTTCAA TATTTTCCAA CCATTGAAGA TCCCAGTCCT TCAGCAATAT TGATGGGGAC AGATGTTGTG AAAAATGTGA ATAAAAACAA TGCGTCTCAT GTTGTGCTGT TTGAAGCTCT ATCCCTGGTC ATGCATCTTG ATGCTGAGAA GGAAATGATG TCACAGTGTG TTGCTTTTCT TGGCAAATTT ATTTCGGTCC GTGAGCCCAA CATCAGATAT CTAGGCTTGG AAAATATGAC ACGAATGCTG ATGGTCACAG ATGTTCAAGA TATCATAAAG AAGCATCAGT CTCAGATAAT CACCTCCTTA AAGACCCTGA CATCAGATTC ACTGTTGGTT GAACTTTCCT GCAGTATTCG TAGACGTGAT CTTGATTTGC TATATGGGAT GTGCGATGTG TCAAATGCAA AGGATATAGT CGAAGAGTTG TTGCAGTATC TTAGCACAAT GGAGTTTTCT ATGCAGGAGG AATTATCACT TAAAGCTGCT ATCCTTGCTG AGAAGTTTGC TCCTGATCTA TCATGGTATG TCGATGTGAT CCTTCAGTTG ATCGACAAGG CTGGGGATTT TGTTAGCGAC GACATTTGGT TTCGTGTGGT TCAGTTTGTA ACAAATAATG AAGACCTCCA GGTCAGTGCT TATATTTTGG GGGAGTATGG TCACCTTCTT TCTCGACAAC CTGGATGCAG TGCAAGTGAA CTCTTTAGCA TCTTACATGA GAAGCTTCCC ACAGTATCGA CTCCCACCAT TCCTATACTT CTTTCCACAT ATGCAACGCT TCTTATGCAC ACTCAACCCC CGGATCCAGA ACTGCAAAAT AAAGTTGGGC TGTATTTCAG AAGTATGAGA GTTGTATTGA TGTGGAGATA CAACAGAGGG GCTGCCTTTA TGGATGTATT GGCTGAGATG CCAAAATTTC CCGAGCGCCA GTCTTCATTG ATAAAAAAGG CAGAATATGT TGAAGATACC GCAGACCAGA GTGCCATCAA GCTTAGAGCA CAACAACAGC CTTCAAATGC TTTTGTTTTG GCTGACCCAC AGCCTGTTAA TGGGGCACCA CCACCTTTGA AGGTTCCAAT TTTAAGTGGA AGCACGGACC CCGAGTCAGT GGCTCGATCT GTCTCACATC CCAATGGACC TTTAAGTAAT ATAGATCCAC AAACTCCATC ACCTGATCTG CTAAGTGACC TGCTCGTTCC TCTTGCGATA GAACAACATG GTCCCATAGG GGTAGAAGGA GTTCCAGATG AAGTTGATGG TTCCGCCATT GTACCTGTTG AAGAGCAAAC AAATACAGTG GAGGTTTTAG CATGGATGAA ATTATGCTTC TACTTTTGCT AG 
Length1722
Protein Sequence
Protein Residue
Map Locationscaffold_6: 20948841.. 20950341
Download Sequence
A.thaliana
AGI-codeAT5G22770.1
Descriptionalpha-adaptin
TAIR curator summary
Alias[alpha-ADR][alpha-adaptin]
Gene coexpression
MR
MR Locus Description
18 Ahg329829 Tetratricopeptide repeat (TPR)-like superfamily protein
19.5448 Ahg472171 semialdehyde dehydrogenase family protein
20.4939 Ahg474162
22.7376 Ahg910021 Protein phosphatase 2C family protein
29.3939 Ahg928482 rhomboid protein-related
35.8887 Ahg333107 Protein of unknown function (DUF1012)
53.6656 Ahg328350 ARM repeat superfamily protein
57.0964 Ahg483048 ABC2 homolog 9
79.0886 Ahg471140 dynamin-like protein 6
86.1858 Ahg922436 RING/FYVE/PHD zinc finger superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression