| Annotation |
|---|
| Description | jgi|Araly1|355755|fgenesh1_pg.C_scaffold_7002928 |
| Sequence |
ATGGGTGATC TTGTCAAAGG AAAATATTGG CCAAAGGTTG CTGATGAACA TCGTAAAAAA CCACAATCGA TTATGTTGGC TGACAAAAAT GCTCCAAATG AAGATGTCTG GAGACAGATT GAAGACATGT GTCGAAGAAC TAGGGCTTCT GCAGTTCCAA TCGTTGCTGA TTCTGAAGGA ACCGATACAA ATCCATATTC ACTTGATGCC TTGGCTGTAT TCATGTTCCG GGTACTTCAA CGAGTTAACC ATCCGGGAAA GCTCGACAAG GAATCTTCAA ATGCAGGCTA TGTGCTATTG ATGTTTTATC ACCTTTATGA GGGAAAGAAC CGCAATGAAT TTGAGAGTGA ATTGATTGAG CGCTTTGGCT CCCTCATCAA GATGCCACTA TTGAAATCAG ACAGGACTCC TTTACCTGAT CCTGTTAAAT CAGTTCTTGA GGAGGGCATA AATTTGTTCA ATCTCCACAG CAGAAGACAT GGGAGACTCG AGTCGACAAA AGGAACATAT GCAGCAGAAT GGACCAAATG GGAGAAACAA CTACGAGATA CTTTAGTTGT GAATTCTGAG TATCTCAATT CTATTCAGGT TCCATTTGAG TCTGTGGTTC ATCTAGTGCG AGAAGAGCTA AAAAATATCG CAAAGGGTGA ATACAAGCCA CCAAGTTCAG AGAAAACAAA ACATGGGTCT ATTGTTTTCG CTGCCATCAA CTTGCCTGCT ACTCAAGTTC ACAGTCTTCT TGAAAAGTTA GCCGTAGCAA ACCCAACAAT GAGATTTTTT CTAGAGGGTA AGAAAAAGAC CATACAGGAA AAACTTGAAC GGTCTCATGT GACGCTTGCC CACAAGAGAA GCCATGGCGT AGCAGCTGTA GCCAGCTATG GTCAGCACTT GAACAGAGAG GTACCCGTAG AGCTCACGGA GCTCATCTAC AACGACAAGA TGGCAACTCT AACTGCCAAT GTCGGATGTG TGGACGGAGA GACGGTAGTC TCCAAGAACG AATGGCCACA TGTTACGTTG TGGACTGGAG AAGGCGTAAC TGCGAAAGAG GCCAACACGT TACCTCAGCT TTACTTAGAA GGGAAGGCGA GCCGCTTAGT GATAGATCCT CCGGTCTCAA TCTCAGGTCC TCTGGAATTT TTCTGA |
| Length | 1146 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_7: 19880958.. 19883893 |
| Download Sequence |
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| A.thaliana |
|---|
| AGI-code | AT1G07910.1 |
| Description | RNAligase |
| TAIR curator summary | Encodes a tRNA ligase that resembles the yeast Trl1 RNA ligase in structure and function but very different in sequence. Like Trl1, AtRNL consists of two domains — an N-terminal ligase component and a C-terminal 5'-kinase/2',3'-cyclic phosphodiesterase (CPD) component— that can function in tRNA splicing in vivo when expressed as separate polypeptides. Requires a 2'-PO4 end for tRNA splicing in vivo. |
| Alias | [AtRLG1][ATRNL][RNL][AtRLG1][ARABIDOPSIS THALIANA RNA LIGASE][RNAligase] |
| Gene coexpression |
|---|
| MR |
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| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
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| The four seasons |
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| Growth Chamber expression |
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