Detail



ID : Ahg356475

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|356475|fgenesh1_pg.C_scaffold_8000262
Sequence
ATGGCAGGAT GTGCAATGAA TTTTCAGTTT TCAAGTGTTG TGAAAGTGAG AAACGAGATA TCTTCGGTGA GGATTTACAA TCGAGGCTTT GTGTTTAGAA ATTTGGCTAA GGAAATGAAG GTTCCTGTTT TGCGGATTAA GGGTGCTTCA GGTAAGCAAA GGTCGAGGCT TTTGATGGTT AATATGTCTC AGTCTCCCGT TGAGCCGCAA TCTAGTGTTG CCGCTACTGA ACAAATGAAA GGAGTAGAAG AAGATGGTAG TGGCGGTAAT GGTGGATTTA ACAACGGTGG TGGAGGAGGT GGAAATGGAG GAGAAGGTGA TGGTGAAGAA GACTATGAAG AAAAAGAGTC TGGACCACTT TTGAAATTTG AAGAGGTCAT GAGAGAGACG GAAGCTCGTG GAGCCACGCT TCCATCTGAT ATGTTAGAGG CTGCTAAGAC CTTTGGGATA CGCAAATTGC TTCTCCTTAG GTACTTGGAT TTGCAGAGCT CAGCTGGGCT GCTTGGCTTT GCTATAAGAT CATGGTCTAT GCTTCGCAGC AGAATGTTGG CTGATCCATC TTTCCTCTTC AAAATAGGGA CTGAGATAGT GATTGATTCG TGTTGTGCCA CTGTCGCTGA AGTTCAAAAG AGAGGACAGT CTTTTTAA 
Length648
Protein Sequence
Protein Residue
Map Locationscaffold_8: 1893903.. 1894891
Download Sequence
A.thaliana
AGI-codeAT2G37860.3
DescriptionProtein of unknown function (DUF3411)
TAIR curator summaryEncodes a protein of unknown function. Mutants have pale leaves, lower cell density in the palisade parenchyma and increased sensitivity to ozone and virulent Pseudomonas syringae
Alias[LCD1][LOWER CELL DENSITY 1]
Gene coexpression
MR
MR Locus Description
2 Ahg922228
16.9706 Ahg480202 Histone superfamily protein
33.3617 Ahg479637 ZIM-like 1
36.2491 Ahg336279
47.0744 Ahg888113 myo-inositol monophosphatase like 2
64.1872 Ahg492039 prenylated RAB acceptor 1.H
66.6783 Ahg356474 Protein kinase superfamily protein
69.0797 Ahg482026 OSBP(oxysterol binding protein)-related protein 1A
76.4199 Ahg493277 RNI-like superfamily protein
81.719 Ahg895867
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression