Detail



ID : Ahg358826

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|358826|fgenesh1_pg.C_scaffold_8002613
Sequence
ATGGAGGTGT CTTGGTTACG AGTTCTTCTA GATAACATCT CCTCCTATCT AACTTTATCA TCTATGGACG ACTTATCTTC AAACCCTGCT CTTAAGTACT ACACCAGAGG TGAAGAGATA TCAAACCTTC TCAAGCCTGT TCTTGAGAAC CTCATTGACT CTGACGCTGC TCCTAGCGAA TTGCTCAACA ACGGTTTCGA AGAATTAGCT CAATACTGTG ATGAACTAAG AGAACAGTTT GAGAGTTGGC AACCTCTTTC AACTAGAATC TTTTATGTTC TTCGAATTGA GTCATTAGCA TCAAAGTTGC GAGAATCCAG TTTGGAAGTC TTTCAGCTCC TCAAACACTG CGAACAACAT TTACCTGCTG ACACTATTTC ACCATCTTTT GAGGAGTGCA TAGAATTGGT GAAGTTAGTG GCAAGAGACG AAATTTCGTA TACTATTGAT CAAGCTCTAA AAGATCAAAA GAATGGTGTT GGTCCTACTT CAGAGGTTCT GGTGAAAATT GCTGAGAGTA CTGGTTTAAG ATCCAACCAG GAGATTCTTA TTGAGGGTGT GGTACTTACA AATATGAAGG AGGATGCTGA GCTTACCGAT AATGACACCG AGGCTGAGTA TCTAGACGGT TTGATCTCTC TAACAACTCG AATGCATGAG TACCTTAGCG ACATAAAGCA GGCTCAGTTA CGTTGTCCAG TACGCGTACC TTCTGACTTC CGCTGCTCTC TATCTCTTGA GCTTATGACT GATCCAGTCA TTGTGGCATC TGGTCAAACA TACGAACGGG TTTTTATCCA GAAATGGATC GATATGGGAC TCATGGTTTG TCCAAAGACA AGGCAGTCTT TATCTCATAC CACTTTGACT CCTAATTTCA TTGTCAGGGC TTTTCTTGCC AGTTGGTGTG AAACTAACAA TGTCTATCCT CCTGATCCAT TGGAGTTGAT TCACTCAAGT CAGCCATTCC CTCTTCTTCT TGAATCAGTG AGAGCTTCAT CATCAGAGAA TTCATCGCCA ATAAAGAATG GCCAGGCAGA TGCAGAGGAA CTGCCTCAGG TCTTTAGTAG GTCTGCTTCT GCACCAGGCA TTGTCTCTGA AGTGGTTTGC AAAACCAAAA GAAGCACTAA TGCTACTGCT GCTGCAGATA GATCAGTGTC ACAGGCACGG AGTAATACCC CTTGGAAATT TCCAGAAGAG AGGCATTGGC GTCACCCCGG GATCATCCCA GCGACCATAA GAGAAACAGG AAGCAGTTCA AGTATCGAAA CCGAGGTGAA GAAACTCATT GAGGATCTCA AGAGTTCTTC ATTGGATACA CAGAGAGATG CTACGGCTCG AATCAGGATA CTATCAAGAA ACAGTACAGA CAATCGCATT GTGATTGCAA GGTGCGGAGC AATCCCTTCG TTAGTGAGTC TTCTTTATTC CACGGATGAG AGAATCCAAG CAGACGCAGT GACTTGCTTA CTAAACTTAT CCATCAACGA CAACAACAAG TCCCTCATCG CGGAAAGTGG AGCTATCGAA CCGCTCATTC ACGTTCTCAA AACAGGATAC TTAGAAGAAG CTAAAGCAAA CTCAGCAGCA ACTCTATTCA GCTTATCGGT GATCGAAGAG TACAAGACAG AGATAGGAGA AGCAGGAGCT ATAGAGCCAC TTGTTGATCT CTTGGGAAGT GGAAGTCTCA GTGGGAAGAA AGATGCAGCC ACGGCTTTAT TCAACCTCTC AATACACCAT GAGAACAAAA CAAAGGTAAT CGAAGCTGGA GCAGTGAGAT ACTTAGTAGA ATTGATGGAT CCTGCTTTTG GAATGGTGGA GAAAGCTGTG GTAGTTCTGG CGAATCTTGC AACGGTTAGA GAAGGAAAGA TTGCGATTGG CGAAGAAGGA GGAATACCGG TATTGGTGGA AGTTGTGGAG TTAGGATCAG CAAGAGGCAA AGAGAATGCA ACTGCAGCAC TGTTGCAGCT TTGTACGCAT AGCCCGAAAT TCTGCAACAG TGTCATAAGA GAAGGAGTGA TTCCACCTCT AGTGGCACTT ACTAAATCAG GAACAGCTAG AGGCAAAGAG AAGGCACAGA ATCTTCTAAA GTACTTTAAA GTACACAGAC AAAACAATCA GAGGAGAGGC TGA 
Length2133
Protein Sequence
Protein Residue
Map Locationscaffold_8: 21009900.. 21012297
Download Sequence
A.thaliana
AGI-codeAT5G67340.1
DescriptionARM repeat superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
12.4499 Ahg943489 Concanavalin A-like lectin protein kinase family protein
16.6132 Ahg324615 DYNAMIN-like 1B
19.5192 Ahg939077 Phosphoglycerate mutase family protein
20.445 Ahg947663 lysine histidine transporter 1
23.2379 Ahg471462 cytochrome P450, family 71, subfamily B, polypeptide 29
23.8328 Ahg934718 Uncharacterised protein family (UPF0497)
24 Ahg470722 exocyst subunit exo70 family protein B2
28.3901 Ahg921443 trehalose-phosphatase/synthase 9
31.496 Ahg480771
33.3317 Ahg485842 homolog of carrot EP3-3 chitinase
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression