Detail



ID : Ahg359609

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|359609|fgenesh1_pg.C_scaffold_467000002
Sequence
ATGACATCGG CGTTGTTATC ACCGTCGCAC CGTAGAAAAC GCCGTCTCAC TCATTTCTTC TTCACCGTAC TCGCTTTCAT CTTACTCGCC GCCTTCATCT ACGGTCATCA TTTCATCTCT TTCTCCCGTC GATCTCTTCA CTCTCCGACA ATCGTCCACC AATCCGCAAT CGTCGTTGTA GTGGACGAAC CTCCTCCGCC TCCACCACCG TCTCCTCCAC CTCCGTCTCC TCCACCACCG TCTCCTCCTC CGCCATCTCC ACCACCACCT GCTTTTGCGT TGGGGAAGAC GCCGGAAGGA TGCGATGTGT TCAAAGGGAA TTGGGTCAAA GACTG 
Length335
Protein Sequence
Protein Residue
Map Locationscaffold_3: 4175519.. 4175903
Download Sequence
A.thaliana
AGI-codeAT3G11030.1
DescriptionTRICHOME BIREFRINGENCE-LIKE 32
TAIR curator summaryEncodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication).
Alias[TBL32][TRICHOME BIREFRINGENCE-LIKE 32]
Gene coexpression
MR
MR Locus Description
28.931 Ahg913429
30.1662 Ahg900194 Serine protease inhibitor (SERPIN) family protein
34.0294 Ahg887694 Plant invertase/pectin methylesterase inhibitor superfamily protein
46.4435 Ahg950240 Ubiquitin-like superfamily protein
48.4768 Ahg891034 histone H2A 4
58.6515 Ahg951789 Leucine-rich repeat (LRR) family protein
71.8331 Ahg919043 snoRNA
79.8999 Ahg905044 RING/U-box superfamily protein
81.148 Ahg341299 Thioredoxin superfamily protein
85.5278 Ahg937947
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression