Detail



ID : Ahg359762

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|359762|fgenesh1_pg.C_scaffold_905000001
Sequence
ATTCTGAGTT AGAGGAATTT ATGGAACAAC AAATTGATGC TTTGCCTCAA AATGAGATGA ATAATGAGAT GAATCCTGAA GAAGATGGGT CATCCGACGA CTCAGATGAG ATGGGTTTGG ACGAGGATGA TGAGTCTTCG GATGAAGAAG ACGTAGAGGC TGAAGCACAG GTTCCTCCGA GCAAGAAGAT GTCAAATGGT ATACATGGGA TACCTAAAGG TGGAGACAAG AACAAGTCAT CAGGTAAGAG GGAGCCTGAA GATGATGTTG ATACTAAAGT GAGTCTTAAG AAGCAGAAGG AAGACGTGAT TGCTGCTGTA CAAAAGCTAA GAAAGTTCCA GCCAAGAAGG CTGCAACCAA GAAGCATGCT GCGGCTGCTG CTAAAAAGGC CAAGGTCTGA GAGTTCGTCT GAAGATGATT CATCCTCTGA TGAGGACTCA GATGATGATT CTGAGGATGA GAAGGTTGCT GCTACCAAGG CTGCAAGCAG TTCAGATTCA TCTGATGAAG ATTCTGATGA GGAAAGTGAA GATACTACTG AATGTCTTCA TGGTGCAATT GTTGTGGAGA AGATGCGTAG GTGA 
Length584
Protein Sequence
Protein Residue
Map Locationscaffold_905: 352.. 3358
Download Sequence
A.thaliana
AGI-codeAT2G27840.1
Descriptionhistone deacetylase-related / HD-related
TAIR curator summaryBelongs to the plant specific HD2 type proteins; similar to nucleolar Zea mays histone deacetylase; HD2-p39
Alias[HD2D][HDA13][HDT04][HDT4][histone deacetylase 2D][HISTONE DEACETYLASE 13]
Gene coexpression
MR
MR Locus Description
3.31662 Virus3877
4.69042 Ahg919650
5.19615 Virus1449
7.48331 Ahg949006
15.2971 Virus0431
15.8745 Ahg939625
21.5407 Virus1887
21.9773 Virus1908
22.9129 Virus1769
23 Ahg929884 MUTS-homologue 5
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression