Detail



ID : Ahg470396

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|470396|fgenesh2_kg.1__350__AT1G04200.1
Sequence
TTTATCAGTT TGAATCTTCA ATTTAATCTC AGATTTAGAT CCAAAATTCA GAGCAAGATC TTTGCATTGT TCATCTCTTA CTTTGTAATG CTGTTGTTCT TTATCGGAAC CAACTCGGTG GACGCGATCG ATTGACTCGT TCTCTTTTTG GATCCTTGTT GACTCGGCGA GCTTGGCTTA GGAGACATGG GAGGTGTGCC TTCAACGCCG CGAAACACCG GTGGTGATGA TGTTTCGGTG GCGGAGTACC TCATTGCTAC TTTTGTTGGG GAGAAATCGT TTCCTTTGGC CTCTGATTTC TGGAACAAGC TCCTTGAGCT TCCGTTGAGT TCTCGGTGGC CTAGTGATCG TGTTCAACAA GCCTGTGAAC TTTTTGAACA AAGCAATGGC TACACTAGGC ACCTTGCAAA ACTATTGATT CATCTATCTT GGTGTTTGCA AGAGCTTCTT CAAGCTTCTG ATGATCAGTC TTCTATCTAT AAGAAAGCTG TTAACGCTAC ATATATTTCT TCCGTGTTTT TGAAGTATTT GATTGAGAAT GGAAAAATTG ACAGTCTCCA GGAGTTACAT CTCTCTCTGG ACGAAAGTGA ACCAGTCCCA CATGGCTTTG TAATGGATCA AGACATCCAG AATTTTGTCA TGCATAGTGT GCTGAGCTTC ATTGGATCAA ATGAAGTGAG TCCCAATTCG TATGTTCTAC ACCGGGAACT TCTGAACTTC ATGCTTGTTA CAATGTCGAC ACAGCTTCTT GCCGGACCAT CACCTGGACC AAGAGATGCG AACCCTTTTA TTGATGCAGC AATGGCTCAG GAAAAGTCTA TAGTTTGTCT CGTAGTCAGA AGATTGCTAC TTAATTATAT TTCCCGACAC CGTACTCCTC CAAATGCAAT TTCCTATATG TATTCTGATG GAGATTCACA AGGCATTTTG GGAAGAGTTG GTTCTGCAGC TGCGAGTTTT GTGCTCTTGC CTTTGAACTA TCTTGTAAGT AACAGTGGCG GATCTAACAA TCCACTAGCA GAGTGCAGCC TTCATGTTTT ACTTATCCTA ATTAACTATC ACAAGTCTAT CATGAGTGAT GAGTCTATGA CGGATAAAAG TGATGACAGT GCTACTTCGG AATCAGTTTC TAAAGTCCAT GTATTTTCCT CTGGCAATAC TTTTAGCAAG GCTCTAGCAA ATGCTAGAGA TGTTGAATTT GACCGCTCAG ATGTGGAGGG AAATGTCCAC CCTGCTGGTC CACATGTTCG GATACCATTT GCTTCACTAT TTGATACTCT CGGCATGTGT TTAGCTGATG AGGGCGCTGT CTTGCTCCTC TACTCACTGT TGCAAGGGAA TTCCGACTTT AAGGAGTATG TGTTGGTGCG AACTGATTTG GATACTTTGT TGATGCCCGT TCTGGAAACG CTATATAACG CTTCAAAGAG AACATCATCT AATCAAATAT ACATGATGCT AATTGTACTT CTCATACTTA GTCAGGATTC ATCTTTCAAT TCAAGCATTC ACAAGATGAT ACTGCCTAGC GTGCCATGGT ACAAGGAGCA TCTCCTTCAT CAGACGTCTC TTGGTTCCAT AATGGTCATT ATTCTCATAA GAACAGTGCA GCATAACCTT TCTAAACTTC GGGATGTGTA TCTGCAGACT ACTTGCCTTG CTACGTTGGC TAACATGGCA CCTCATGCCC ATCATTTAAG TGCATATGCC TCACAGAGGC TTGTCAGCCT TTTCTACATG CTTTCTCGAA AGTATAACAA GTTATCGGAG TTGACAGGTG ATAAGGTCCA AAGCATCAAA ATTAACTTGT CAGGAGAGGA TCTTGGCGTT TCAGAAGATT TGGCAGCAGA GTTGCAGATC TTTACTGATT TCCTGAGACT TGTCCTAGAT ATATTAAATG CAATTTTGAC ATACGCATTG CCGAGAAATC CCGAGATTGT CTATGCGATT ATGCACCGAC AAGAAGTGTT CCAACCTTTC AAGAACCATC CACAGTTCCA TGAGCTAGTG GAAAATATAT ACACAGTCTT AGATTTTTTC AATAGCCGCA TGGACTCTCA AAGATCGGAT CGAGAATGGT CAGTGCAGAA AGTTCTTCAG TTCATCATCA ACAATTGCCG GTCTTGGCGA GGTGAAGGCA TGAAGATGTT TACTCAACTT CACTTCTCAT ACGAGCAAGA AAGCCACCCA GAAGAGTTCT TTATTCCATA TGTTTGGCAG CTAGCATTTT CCCGATGTGG ATTCAGTTTT AATCCAGACG CCATCAACTT ATTCCCAGTG CCACACCCAG CTGGAAAAGA GATAGAAGAC GAAAGAGGGG AAGAATTGGA AGGGAAAGAG AAGGTGCAAG AGTTGAAAGA ACAGAGAATC GTCTTCGATC CATAAGTATT TTTCGATATA GGAGAGCTTC GATGGGGGCG TATGTATATA TTTATACGGT TTAGGGTTCA AATTTTTTTA ACAATGTAAC TTTTCAGTCT ATAGATTTTC AATCCATTAA TAGTTGAGCC TCTGGAGTCT TAAACCAAAT ATTTT 
Length2535
Protein Sequence
Protein Residue
Map Locationscaffold_1: 1263287.. 1268191
Download Sequence
A.thaliana
AGI-codeAT1G04200.1
Description
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
3.31662 Ahg496218 Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein
4.89898 Ahg926119 Protein phosphatase 2C family protein
5.2915 Ahg495374 RNA-binding KH domain-containing protein
5.47723 Ahg940612 1-deoxy-D-xylulose 5-phosphate synthase 3
10.4881 Ahg492732 Transducin/WD40 repeat-like superfamily protein
11.4018 Ahg493493 Sec23/Sec24 protein transport family protein
12.9615 Ahg937723 Major facilitator superfamily protein
14.2478 Ahg936621 methyltransferases
14.2829 Ahg486829 homocysteine methyltransferase 2
14.3178 Ahg493890 uridine kinase/uracil phosphoribosyltransferase 1
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression