| Annotation |
|---|
| Description | jgi|Araly1|470401|fgenesh2_kg.1__355__AT1G04250.1 |
| Sequence |
AGACAGAGAT ATAATACAGA CTCATATCAC TTTGTATTAT TTGAGTGTTT TTATAAAACC ATTTTTCCAT TTTCCTCATC ACCTTCCCAA AGAAGAAGAA GAGAAGAAAG TTTAATAATG ATGGGCAGTG TCGAGCTGAA TCTGAAGGAG ACTGAACTGT GTCTTGGTCT TCCCGGTGGA GATACGGTGG CTCCGGTAAC CGGAAACAAG AGAGGGTTCT CAGAGACGGT TGATCTGAAG CTGAATCTTA ACAATGAGCC TGAAAACAAG GAAGGGTCTA CGACTCATGA CGTCGTGACT TTTGATTCCA AGGAGAAGAG TTCTTGTCCC AAAGATCCAG CCAAGCCTCC TTCCAAGGCA CAAGTTGTGG GATGGCCACC GGTGAGATCA TACCGGAAGA ACGTGATGGT TTCGTGCCAA AAATCAAGCG GTGGCCCGGA GGCGGCGGCG TTCGTGAAGG TGTCAATGGA CGGAGCACCG TACTTGAGGA AAGTAGATTT GAGGATGTAT AAAAGCTACG ACGAGCTCTC TAATGCTTTG TCCAACATGT TCAGCTCTTT TACCATGGGA AAACATGGAG GAGAAGAAGG AATGATAGAC TTCATGAATG AGAGGAAATT GATGGATTTA GTGAATAGTT GGGACTATGT TCCCTCTTAT GAAGACAAAG ACGGTGATTG GATGCTCGTC GGCGACGTTC CTTGGCCAAT GTTCGTTGAT ACATGCAAGC GTTTACGTCT CATGAAAGGA TCTGATGCCA TTGGGCTCGC ACCGAGGGCG ATGGAGAAGT GCAAGAGCAG AGCTTGAAGT CAAAAAGGAT AAGTGGTAAT GATTATATAT TTGATTAACA CATTGATTGG TGTTAATTGT TTTTTTTTTC TTACGATGAA ATACATTGTT CAGTTTCTTT TGATTGTCTG TGTTTTGATC TGGATTTGGT ATGTAGATAT AGTTTGTATG CTATTATGTG TAATGAACTT AAGTTAAATA TTTGAGACAT TTGTAATGGA AAATGTGTAA TAATTTGAAC ATCTTAT |
| Length | 1037 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_1: 1291940.. 1294299 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT1G04250.1 |
| Description | AUX/IAA transcriptional regulator family protein |
| TAIR curator summary | Transcription regulator acting as repressor of auxin-inducible gene expression. Auxin-inducible AUX/IAA gene. Short-lived nuclear protein with four conserved domains. Domain III has homology to beta alpha alpha dimerization and DNA binding domains. Involved in auxin signaling. Auxin induces the degradation of the protein in a dosage-dependent manner in a process mediated by AtRac1. Auxin induced the relocalization of the protein within the nucleus from a diffused nucleoplasmic pattern to a discrete particulated pattern named nuclear protein bodies or NPB in a process also mediated by Rac1. Colocalizes with SCF, CSN and 26S proteasome components. |
| Alias | [AXR3][IAA17][AUXIN RESISTANT 3][indole-3-acetic acid inducible 17] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 7.87401 |
Ahg491144 | catalase 2 |
| 8.7178 |
Ahg483058 | Double Clp-N motif-containing P-loop nucleoside triphosphate hydrolases superfamily protein |
| 11.4891 |
Ahg943721 | cytochrome P450, family 86, subfamily A, polypeptide 2 |
| 13.784 |
Ahg485641 | alpha carbonic anhydrase 1 |
| 16.1555 |
Ahg481640 | Cysteine proteinases superfamily protein |
| 17.6635 |
Ahg894303 | FAD/NAD(P)-binding oxidoreductase family protein |
| 20.199 |
Ahg940842 | Pentatricopeptide repeat (PPR-like) superfamily protein |
| 23.9374 |
Ahg950218 | |
| 24.1247 |
Ahg941951 | squalene monoxygenase 6 |
| 26.2298 |
Ahg480385 | |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
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| The four seasons |
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| Growth Chamber expression |
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