Detail



ID : Ahg470424

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|470424|fgenesh2_kg.1__378__AT1G04450.1
Sequence
TCTCTCTCTC TTTCCAATTC TTTTCTCAAT TATTTCCAAA ATGAAAATCA ATGCTATCAA GGTTTTGGCA CATTCAGAGA GTTACAGCAT CTGAATTTCT AACCGGAAAC CATTCCTCCC GTAATGACGA CCGTGAAAGG CCTTCTTAAA GGCCTTCGCT ACATTACTCA GATTTTCGAC GAAGATAAAG ACAAGGATAT GCAGATCGGG TTTCCTACCG ATGTAAAGCA TGTCGCCCAC ATCGGATCCG ACGGTCCCGC GGCCAATATG CCAAGCTGGA TGGGTGACTT CAGACCTCAA GACAATGAGA ATGGTCAAGT AGTTTCTCGA GGAGATGCCA ACAACAATCA AATAGGAGAA GGAGTTGGAT TACAAGAGTT GTTGCCTCCT ACCGAGAAAC CGAAGCACAA GAAGACTAGG CGTAAATCCG AGACGGTCTC ACAAAACGGT TCTCCGCCTA GGCGAAACAG CAGTGCGTCA GCATCAGATA TGCAACCAAA ACACCCGAGA CGTCACCACA GGAGTAGGCA CGGATCGATA GATTCATCGA ATGATCCATC AGTTAGGAGG AGGCGTGTTG TCTCGGTTAC CACTGATATG GAAGGTTCAT ACCCTCTTTC AGACAGTTCT ACTCATACTA GAAAGTCTAC ATCACGTCAT AGGAAGCCAA AAGAATCAGG AGGAGGAGAG CTATCAATGA AGAAGACAAA AGGGAAAACT GAGAATCCTA TTGTTCAATC AGTCGATAAA TGTAATGATA ATAATATCAG TGACAAAGAG TAAAACACAT CATGGTTTTG 
Length800
Protein Sequence
Protein Residue
Map Locationscaffold_1: 1375137.. 1376185
Download Sequence
A.thaliana
AGI-codeAT1G04450.1
DescriptionROP-interactive CRIB motif-containing protein 3
TAIR curator summaryEncodes a member of a novel protein family that contains contain a CRIB (for Cdc42/Rac-interactive binding) motif required for their specific interaction with GTP-bound Rop1 (plant-specific Rho GTPase). It interacts with Rop1 and is involved in pollen tube growth and function, and exocytosis in the pollen tube tip. The protein most similar to RIC1 (family subgroup III). Gene is expressed predominantly in inflorescence and flower tissue. Interacts with ROP1 to modulate calcium ion influxes required to generate tip-focused calcium gradients.It
Alias[RIC3][ROP-interactive CRIB motif-containing protein 3]
Gene coexpression
MR
MR Locus Description
46.9574 Ahg911676 Galactose oxidase/kelch repeat superfamily protein
57.6541 Ahg471506 Protein of unknown function (DUF1262)
64.0078 Ahg913509
84.8528 Ahg483390 Plant basic secretory protein (BSP) family protein
86.1684 Ahg952291
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression