Detail



ID : Ahg470504

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|470504|fgenesh2_kg.1__458__AT1G05140.1
Sequence
TCAATCCTAT CCACAGATCG TTAATGTTTT TTCGTTATCT GCTCTGTTTT TCAATGGCTT CTATAGTTTC TCTTCTCCGC ACTCTAAACT CTCAAAACCT CACGAAATCA TGCTATTAAA CATTTGTTCT TCTCCAATTT CTCATCGAAA TCCTCTCTTC CTCTCTACTT TCAACAATCC CACTTCAAAT TTTCCTCCAA AATCTCATAT TTCCACCAAT CTCTCCACTC TATCGAATCA AACCTTCTAC GGCACCAAGA ACAGAGCTTT ACTCAGAAAC AAGAGATACC CATATAACAG AACACAAGCT CTCGCTGGAT TCGATTTCGG AAGTTTCGAA TCAGTTCTCG AAGCTTCCGC TGTTCTCACT GCGATCATCG TCGTCCACGA GACCGGTCAC TTCTTAGCTG CTTCTCTTCA AGGTATCCAT GTGAGTAAAT TCGCGATAGG TTTTGGTCCG ATTCTAGCTA AATTCAATTC CAACAATGTC GAATACTCTC TTAGGGCTTT TCCTTTAGGT GGATTTGTTG GATTCCCTGA TAACGATCCC GACAGTGGAA TCCCTTTAGA CGACAAAAAT CTTCTCAAGA ATCGACCGAT TTTGGATAGA GTGATTGTTG TTTCAGCTGG AATTGTCGCT AACGTCATCT TCGCTTACGC TATAATCTTT ACTCAAGTGG TATCTGTTGG ATTACCAGTT CAAGAATCGT TTCCTGGAGT TCTTGTTCCT GATGTTAAAT CTTTCTCTGC TGCTTCTCGT GATGGATTGC TTCCGGGAGA TGTTATCTTA GCCGTTGATG GTACTGAGCT ATCTAATTCC GGTTCTGATT CCGTTTCTAA AGTTGTTAAT GTCGTTAAGA GGAATCCAGA GCACAATGTG TTGCTCAGGA TCGAAAGAGG GAAGGAGAAT TTCGAAATCC GGATCACGCC GGATAAGAGT TTCGATGGAA CGGGGAAAAT CGGTGTTCAG TTATCACCGA ATGTTAGATT CTCTAAGGTG AGACCGAAGA ACATACCGGA AACTCTTAGT TTCGCCGGGA GAGAGTTCTT TGGGCTCTCT TACAATGTTT TGGACAGTTT GAAACAAACT TTCTTGAACT TCTCTCAAAC CGCTAGTAAA GTCGCTGGTC CCGTGGCGAT CATTGCGGTT GGAGCTGAAG TGGCGAGATC AAACACGGAC GGGCTATACC AGTTTGCAGC ATTGCTGAAT CTAAACCTTG CGGTGATCAA TCTGTTGCCT TTACCGGCTC TTGATGGTGG AACTTTGGCT CTGATCTTAT TGGAAGCGGT TCGAGGCGGG AGGAAATTAC CGTTAGAGGT GGAACAAGGG ATTATGTCGT CTGGAATCAT GCTTGTGTTA TTTCTCGGTT TATTTCTCAT CGTCAAGGAC ACACTTAATC TTGATTTCAT CAAAGAAATG TTGTAA 
Length1426
Protein Sequence
Protein Residue
Map Locationscaffold_1: 1676275.. 1677687
Download Sequence
A.thaliana
AGI-codeAT1G05140.1
DescriptionPeptidase M50 family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
2.64575 Ahg929660
8 Ahg472344
9.59166 Ahg938013
9.8995 Ahg492762 PPDK regulatory protein
12.7279 Ahg926183 magnesium ion binding;thiamin pyrophosphate binding;hydro-lyases;catalytics;2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthases
14.2829 Ahg474906 Pentatricopeptide repeat (PPR) superfamily protein
18.9737 Ahg495834
20.445 Ahg478365 P-loop containing nucleoside triphosphate hydrolases superfamily protein
27.5681 Ahg949897 Protein phosphatase 2C family protein
28.2843 Ahg492004 thylakoid-associated phosphatase 38
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression