Detail



ID : Ahg470506

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|470506|fgenesh2_kg.1__460__AT1G05160.1
Sequence
GGTTTGGGTT TTGGTCGTCT TCTTACTCGA AAGTCGAAAC CCTTGTGAGA GAACTTGGAG ATGCCGAAGA AGGTAACTCC GACGAGTACT GGGACCGGTT TATTGAGCTA TTTTGCAGAA TCTGAGGGTC AAGTCAAGTG GTCTCTCCTC TCTCATTGCC TTATCTTAAT TACGACTTTC CAGGTGTGAG TAATGTTATA CACGTATCTA CATGAAGAGG AGGATATAAA TATCCATTTA TGAGAAAAGA AAAAAGGCTA CAAAATAAGT TGGGAAGTTG AACTAAGTGA AAAAAGCTAT GGCGGAAACA ACGAGTTGGA TCCCAGTATG GTTTCCTCTG ATGGTGTTGG GATGTTTTGG TCTGAATTGG TTGGTTAAGA TGGTGAATGT GTGGCTCTAT GAGTCCAGCC TTGGGGAGAA CAGGCACTAT CTGCCGCCAG GTGATTTGGG TTGGCCTTTC ATTGGCAACA TGTTGTCGTT TCTCAGATCG TTCAAGACTT CTGACCCTGA TTCCTTCACC AGCACTTTCA TCAAAAGGTA TGGACCTAAA GGTATCTATA AAGCACACAT GTTCGGGAAC CCAAGTATAA TAGTAACAAC ACCAGACACT TGCCGGCGTG TGCTGACAGA TGATGATGCA TTCAAGCCAG GTTGGCCAAC ATCTACAATG GAACTCATTG GAAGGAAGTC ATTCATTGGT ATCTCATTCG AGGAACACAA GCGGCTCAGG CGCTTGACTG CTGCTCCAGT CAATGGCCAT GAAGCCCTCT CTACTTACAT ACCGTACATT GAAGAAAACG TTATTACCGT TCTTGACAAG TGGACTAAAA TGGGAGAGTT CGAGTTCTTG ACTCATCTGC GTAAGCTTAC CTTTAGGATC ATCATGTACA TCTTTCTCAG CTCTGAGAGT GAGAATGTAA TGGATGCATT GGAACGAGAA TATACAGCTC TTAACTATGG AGTTCGAGCA ATGGCAGTCA ATATTCCTGG ATTTGCTTAT CATAGAGCAC TCAAGGCGAG GAAAACACTT GTAGCTGCCT TTCAGTCCAT AGTGACTGAG CGCAGAAATC AAAGGGAGCA GAACATTTTA CCAAATAAGA AAGATATGTT AGACAATCTT CTTAATGTTA AAGATGAAGA GGGAAGAACA TTGGATGACG AAGAAATTAT CGATGTTCTT CTGATGTATC TTAATGCCGG TCATGAATCC TCTGGCCACA CCATTATGTG GGCTACCATT TTTCTACAAG AACACCCTGA GTTTCTTCAA AGGGCAAAGG TAAATGAACA AGAAATGATC CTTAAAAATA GGCCTGAAGG TCAAAAAGGT CTAACTCTAA AAGAAACCCG GCAAATGGAG TTCTTATCGC AGGTTGTAGA TGAGACACTT CGAGTGATAA CATTCTCACT CACTGCTTTT CGGGAGGCAA AGACTGACGT CGAAATGAAT GGCTATTTGA TCCCAAAAGG TTGGAAGGTT TTGACATGGT TTAGGGATGT CCACATTGAC CCTGAAGTCT ATCCGGATCC AAGAAAATTT GATCCTTCTA GATGGGATAA TGGTTTCGTA CCAAAAGCTG GTGCGTTCCT TCCTTTTGGT GCTGGAAGCC ATCTATGCCC AGGAAATGAT CTCGCGAAGC TCGAGATATC AATTTTTCTT CATCATTTCC TCCTGAAATA TCAGGTGAAA CGGAGCAACC CCAAGTGTCC AGTGATGTAT TTGCCTCACA CCAGACCAAC TGATAATTGC TTGGCAAGAA TTAGTTATCA GCAAAACATT AGATTTTCAT CTTCTCCGTT AAGTTCTAAT GAGATGCCGT TAAGTTTGGT TTATCAGTTA TAGAGTTCGT TAACTCTTTA GTAAAACAAT CGTTGTCAAA AATAAAAGTT AAAATATATA TATATATATA CATTTTTTTT TTTCTCTCGA AACTTCATCA GACTACTTAC TCTGTTCCAT GAAACAGAGC TTTGTTGTGT TCATTTGCTA TAAAAAAAAA AAACTTCATA GGTC 
Length2014
Protein Sequence
Protein Residue
Map Locationscaffold_1: 1680866.. 1684379
Download Sequence
A.thaliana
AGI-codeAT1G05160.1
Descriptioncytochrome P450, family 88, subfamily A, polypeptide 3
TAIR curator summaryEncodes an ent-kaurenoic acid hydroxylase, a member of the CYP88A cytochrome p450 family.
Alias[ATKAO1][CYP88A3][KAO1]["cytochrome P450, family 88, subfamily A, polypeptide 3"][ENT-KAURENOIC ACID OXYDASE 1]
Gene coexpression
MR
MR Locus Description
6 Ahg495044 mitotic checkpoint family protein
13.0384 Ahg481953 tubulin folding cofactor A (KIESEL)
19.3391 Ahg495592 SWAP (Suppressor-of-White-APricot)/surp domain-containing protein
24.1039 Ahg357071 Cyclin family protein
26.0768 Ahg480572 ubiquitin-conjugating enzyme 23
28.3549 Ahg491471 serine hydroxymethyltransferase 3
33.9853 Ahg939173 Bestrophin-like protein
36.606 Ahg489030 calmodulin 6
38.6523 Ahg930544
41.2795 Ahg342721
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression