Detail



ID : Ahg470549

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|470549|fgenesh2_kg.1__503__AT1G05490.1
Sequence
TCTCTCTGCC CATCTCTCTC TGTTCCATTT TCTGAAACCA CTAAATTTTC TCTCAAAAGT CAAGAACTTC ATCATCTTCC TCTCAAGTGA AAGATTCAAT TTTTTCTCCT CTGAAGATCT TTGTGTTTGC TCTAATGGAG TGGATTGGGA AGAGAGTGAA GTCCCGGAGC TGGCAGCGTC TTCAGGTGGT TAACAAGCGG AAGAAGATGG AGACTGTAGC TCCCGTGACA TCTCCTCCAA AGAAACGACG GCAGAAGAAA CGAACGGATC CTGATTCTGA CATTCAAGAC ATCACACCAA CTTACAACGA CCGTGTTCCT CCTCCTCAAG TCAGTAACAG GTACTCTGCA CCTAACAACT CTGTAAAAGA GAGTTTTTCT TGGATAATCA GAGATCTGAA TGTGGAGAAG AAATCAGGTC CAAGCTCCTC TAGGTTAAGA GATGGGTCTG AACAGAACCC ATGTGTGAAA GAGAGTTCTT TTAGGGTTAG TGATCTGGGT GTGGAGAAGA AATGTTCCCC TGAGATTATA CCAGTTCCGA GCTTTTCTAA GTTAAAGGAT GGGTCTGAAC AGAAGAACAC ATGTCTGAAT GAGAAGACTT CTCCTGAGAT TACTGATTTG GATGTTGTAA TATCCGTTCC CAGCTCTTAT GTCTTAAAAG ATATGTCTGA AGAAAACAGA TTTTTGAAGG AGAAGTGTTC TCCTGAGATT AGAGGTTTGG TTGTTGAAAA ATCAGTCCTT CGTGAAATAG AGATTCTTTC AGATTCTGAG TCTGAAATTG AAGCTAGAAG AAGAGCTTCA GCCAAGAAGA AGCTATTTGA GGACAGCAGC AGAATTGTAG AGTCTATCAG TGATGGCGAA GATAGCACAA GTGAAACCGA TGAAGAGGAA GAAGAAAATC AAGATAGTGA AGATAATAAC ACCAAAGATA ATATAACGGT GGAGTCTTTG TCTTCTGAGG ATCCATCTTC ATCATCATCA TCATCATCAT CATCATCATC TTCCTCTTCT TCCTCGAGTG ACGATGAAAT ATATTTAAAG GAGGTAGTTG GAGATAATAC AGATGATGAT GACTTGAGAA AGGCCAGTTC ACCAATCAGG AAAGTCTCTT TAGCGGAAAG GAAGCCTTTG GTAAGGTATA AGAGGTCTGG TTCTAGCTTA ACCAAGCCTA TAAAAAAGGA CAAGAAGATT CAGAAACTAA ACCACCGAGA AGAAGAAGAA AAAGAACGAC AAGGAGAAGT TGTAAGAGTA GTAACAAAGC AGCCGAGCAA TGTTGTGTTC ACTTGTGCTC ATTGTGGCAA AGAGAACACA GGAATCCCTG AATCTCACAG CTCTTTCATT AGACCACATT CATTAAGAGA TGAAATTGAG GATGTGAACA ACTTTGCTTC TACTAATGTA TCAAAGTATG AAGATTCTGT TTCCATCAAC TCTGGGAAGA CAACTGGAAA TCCATCCAGA CCTGAAGTGG AGAATGCAGA GACAGGAAAA GAAGTAAAAA AATTTGAGAA GCCATCCATA TCCAGACCTG AAACTTTCAC TACAGAGAAA GCAAAAGAGG TACAAGTACC TGAAAAGCCA TCAACACCTG AAATTTTCGG TTCAGAGAAA GCAAAAGAGG TACAAGCACC TGAAATGCCA TCAAGACCTG AGATTTTCAG TTCAGAGAAA ACAAAAGAGC CACAAGCACC TGAAATGCCT TCAAGACCTG AGATTTTCAG TTCAGAGAAA GCAAAAGAGG TCCAAGCCAA TAACAGCTTT GGTTTGATGA CACCTACAGT TGCAGTTGCG GAGGGGTTAA ATAAGTCTGT TGTGACTAAT GAACATGTTG ATGATGACTC TGACTCTTCT ATTAGCTCTG CAGATGGATA TGAATCTGAT CCTACTCTAA AAGACAAAGA GGTCAAGGTT AATAACAACT CGGATTGGAG AATGATGAAT GGAAACCATA AAGAAGTTGA TCTATTCAGG CTTCTTGTAA ACTCTGTTTG GGAGAAAGGT CAATTAGGTG AGGGAGAGGA AGAAGCAGAC GAACTAATTT CTTTACCTGA AGACCAATCT CAAGAACAAG CAAAGGAAGA TCAAAGAAAA TATGATGATG ATGGACTTCT AATCATTAGG CCACCACCAT TGATAGAGAG ATTTGGTGTG GAGGAGCCTG AATCACCACC TGTGGTTTCT GAGTTAGATT CAGAGGAAGA GACGTTGTGG GAAGAACTAG CATTTTTCAG TAAATCTAAT GAAATCGGCG GCAACGAGCT TCCTTCAAAT GTAGAGAAAG ATATATCAAC TAAAGAAACT CCAGCAGCAC AATGTAAAAA AGGGAATCAC GAGCTGTGTC TTGATCTTGA GGTTGGTTTG AAGTGTATGC ACTGTGGCTT CGTGGAGAGA GAGATCCGAA GCATGGATGT ATCTGAGTGG GGAGAGAAGA TTACACGGGA AAGGAGAAAA ATTGATAGAT TTGAAGAGGA AGAAGGCAGC AGCTTCATTG GGAAACTTGG TTTTGAACCT CCTAACAACA GCTTAAATGA GGGATGTATT TCTTCTGAAG GAACTGTTTG GGATAAGATC CCAGGGGTCA AATCTCAAAT GTATCCTCAC CAGCAAGAGG GTTTTGAGTT TATCTGGAAG AACTTAGCCG GTACAATCTT GTTGAACGAG CTCAAGGACT TTGAGAACAG CGATGAGACC GGAGGATGCA TCATGTCACA CGCTCCCGGG ACAGGAAAAA CTCGCCTGAC CATCATTTTC CTGCAAGCCT ATCTTCAATG CTTCCCAGAT TGCAAACCAG TGATCATTGC TCCTGCAAGC TTGCTTCTCA CATGGGCAGA GGAGTTCAAG AAATGGAACA TAAGCATTCC CTTTCATAAT CTCAGCAGTT TGGACTTTAC TGGGAAAGAG AGCTCCGCGG CACTGGGGCT TTTGATGCAG AAGAATGCCA CTGCAAGAAG CAATAATGAG ATAAGGATGG TGAAAATATA CTCTTGGATA AAATCGAAGA GCATACTCGG GATCAGCTAC AACCTCTATG AGAAGCTTGC AGGAGTTAAA GACGAGGACA AAAAGACAAA GACAGTGAGA GAAGTGAAAC CAGACAAAGA ATTAGATGAT ATCAGAGAGA TACTTATGGG AAGGCCTGGA CTTCTTGTTC TTGACGAGGC ACACACGCCT CGGAACCAGA GAAGTTGTAT ATGGAAAACA CTATCCAAAG TGGAAACACA GAAACGTATC TTGCTTTCTG GAACTCCTTT CCAGAACAAC TTCCAGGAGC TGTGCAATGT TTTGGGACTC GCAAGACCTA AATATCTGGA AAGGCTCACA TCCACACTCA AGAAGAGTGG GATGACTGTA ACAAAGAGAG GAAAAAAAGC TTTGGGGAAT GAAATCAACA ACCGTGGGAT CGAAGAGCTG AAGGCTGTTA TGCTTCCATT TGTGCATGTC CATAAAGGAA GCATTCTTCA AAGTAGCCTC CCTGGTTTGA GAGAATGTGT TGTGGTGTTA AACCCACCTG AGCTGCAGAG GAGAGTCCTA GAATCCATTG AAGTCACTCA CAACCGGAAA ACAAAAAACG TGTTTGAAAC AGAACACAAG CTGTCTCTGG TCTCAGTCCA TCCTTCTCTA GTCTCTCGCT GCAAACTTTC TGAGAAGGAA CGTTTGTCCA TCGATGAGGC TTTGCTTGCA CAGCTTAAGA AGGTAAGACT TGATCCAAAC CAAAGTGTGA AAACGAGATT CCTCATGGAG TTCGTCGAGT TATGCGAGGT GATAAAGGAG AAAGTGTTGG TCTTCAGCCA ATACATCGAC CCATTGAAAC TGATCATGAA ACATCTGGTC TCTCGTTTCA AGTGGAATCC AGGGCAGGAA GTGCTGTACA TGCATGGCAA ACTCGAGCAA AAACAAAGAC AAACCTTGAT CAACGAATTC AATGATCCAA AATCCAAGGC CAAAGTGTTC TTAGCTTCAA CAAAAGCCTG CTCTGAAGGG ATCAGTCTGG TAGGAGCATC AAGGGTGATT CTTTTGGATG TTGTGTGGAA TCCGGCAGTG GAAAGACAAG CTATAAGCCG TGCTTACAGA ATCGGACAGC AGCGGATTGT TTACACATAT CACTTGGTTG CAAAAGGAAC TCCTGAGGGA CCAAAATACT GTAAGCAAGC ACAAAAGGAT AGGATCTCAG AGCTTGTGTT TGCATGCTCT TCAAGACATG ACAAAGGAAA GGAAAAGATT GCTGAAGTTG TGACAGAGGA TAAAGTGTTG GACACTATGG TGCAGCATTC GAAGCTTGGG GATATGTTTG ACAATCTCAT CGTCCAACCA AAGGAAGCAG ATTTAGTTGA AGGTTTCAGC ATTCTTATGC CATGAGTCAT CACAAAACTC TTGGCTTCAT TCATCTCTTC CCTATAATAT CTTATGCCAT TTCATGTTTC CAAGACTTGT GTTTTGCATT TGTATGATCC TTTTGGGCAA CTTCTTTCTC GGAAAAACCT AGGCTTTTGT CTGGATTTCA TTATGTCTGC TATGAACTCT AACTTATATA GCAAAATGTT TCATGT 
Length4546
Protein Sequence
Protein Residue
Map Locationscaffold_1: 1828073.. 1832953
Download Sequence
A.thaliana
AGI-codeAT1G05490.1
Descriptionchromatin remodeling 31
TAIR curator summary
Alias[chr31][chromatin remodeling 31]
Gene coexpression
MR
MR Locus Description
1.41421 Ahg343150
2.82843 Ahg931296
14.2127 Ahg907675
14.3178 Ahg931293
17.088 Ahg948810
19.6469 Ahg496298 Polynucleotidyl transferase, ribonuclease H-like superfamily protein
20.7846 Ahg930916
21.4942 Ahg347293
23.3238 Ahg342948
24.98 Ahg476175 KNOTTED-like from Arabidopsis thaliana 2
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression