Detail



ID : Ahg470624

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|470624|fgenesh2_kg.1__578__AT1G06110.1
Sequence
GAACTGAATC AGAGACGACA AAAGCAACCG AGAGAAAGCG AAGAAGTGTC GTTGTCTGAG ACGAAAGCTT TGGGGCTAGA AGATGCTGGA GATTTGATTC TCCACATCGT ATTATCCAAA ATCGGCCCTG AAAGCACCGC GAGAGTGGCT TGTGTCAGTA AACGCCTTAA GGTTTCCGCC TCCGAGGAAT CTCTCTGGTC GATCTTCTGC TCCAATGATC TTAATATCTC TACTCCCCTC GATCCCCATG GAGATCCTGC TCCTTCCTTC AAGAGAGCAT ATCAATTGTG GAGGGAGTCA TTTAGAATGT ATCCTTGGAA TCTCGTTAAG CGCGTTAGAC TTTGTTGGGA CAAGCTCAAA CTATGGTTGA GCCTAAACTT CCCTGAAGCA AAGGCAACTC TGAGGAAAGG TGCTACAGAA GATGATCTTC AAGAATTGGA GACTTGTCTC AAAGTGAAAC TTCCTCTTCC CACTAGGCTT CTCTACCGTT TCGTTGATGG TCAAGAGCTT TCTTCCTCCA ATGGGCTTGA TGGCTCTTTG GGGCTTATAG GTGGCTATTC TGCTTACTCT CATGACGTTA ATGTCTACTT GCTACCTCTT AAAGAAGTCA TTAGGGAGAC AAAGGAAACC ATGCTCCACC TCGGTTTCTC CACCAGATTA AACCTTATCG TTATGGCTGC ATCCGTAGTT GCCAGTCTGA AAATCTTTTT ATTAGACTGC ACAAACGGAC AGCTTTTTAC TGGGACAAGT AACCGCCAAT TGCTTCCTTG TGTACCCGAT TCTTTGGTTA GATCCGTGCA TGATATCAAC GGGGATCAGC AACAGGATGC CATGCTGCTT TGGTTGGAAG AACATGGACG GCGGTTACAA ACCGGCACTA TAAAAGTCCG CGAACAGCAC AATGTCAAGA GTATCAGTTT GTTCCCGGAG ATTCCTCCCT TGTGTTCTGT CGCCGTAACT AATGGTGTGC AGGTACGTGC TTCGTCTGTT TTTATCCCGG AAATATCTAA CCTTCGGGAT CAGCCACCGG CATACTGGTA TGCGTATTCA ATCCGGATGT CTCTCATGCC AGAAGGATGC ATCTTGAATG GGACACATCA TAGCTCTTGC CAACTGTATT GGAGACGTTG GGTTATCCGA GCTGATAATG AAGCGATAGA TAATGTTAAT GGAGAAGCTG TGATAGGAAA GTACCCGCTC TTACAAGCTG GAGAGGAAGA GTTTGTGTAT GAGAGTTGTT CTAGTTTTCC AACAACTGCT GGATCCATTG AAGGCTCTTT CACCTTTGTG CCTGGAAGTT TGAGAGATCC AAAAGGGGGT CAATTCGAAG TCAAAGTCGC AGAGTTTCCT CTGGAGTTAC CGGACTACAT CTTCTGAACT CTTTCTGGCA CAAGGTTCGT TACTCTTTCA AGATAATTCG TTATATCGGT TTTCATTGTC CATACAGCAT GCAATGTACT TATAAAATAA AGGTGTGGGA TCAACTGGTT TACAAGTTCA TGAGAACACA TTATTCTTAA CAGTTTTACT TAA 
Length1533
Protein Sequence
Protein Residue
Map Locationscaffold_1: 2068076.. 2070042
Download Sequence
A.thaliana
AGI-codeAT1G06110.1
DescriptionSKP1/ASK-interacting protein 16
TAIR curator summary
Alias[SKIP16][SKP1/ASK-interacting protein 16]
Gene coexpression
MR
MR Locus Description
3.4641 Ahg495793 myristoyl-CoA:protein N-myristoyltransferase
6.9282 Ahg922878 SEUSS transcriptional co-regulator
9.48683 Ahg488313 Protein kinase superfamily protein
9.48683 Ahg497403 HR-like lesion-inducing protein-related
13.0384 Ahg949102 E3 ubiquitin ligase SCF complex subunit SKP1/ASK1 family protein
13.0767 Ahg356151 DNA/RNA polymerases superfamily protein
16.4317 Ahg490436
17 Ahg943492 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
17.2916 Ahg480631 Seven transmembrane MLO family protein
21.4476 Ahg328749 prenylated RAB acceptor 1.C
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression