Detail



ID : Ahg470918

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|470918|fgenesh2_kg.1__872__AT1G08560.1
Sequence
GTGAAAAAGA TGAACGACTT GATGACGAAA TCGTTTATGA GTTACGTTGA CTTGAAAAAA GCAGCGATGA AGGATATGGA AGCAGGACCT GACTTTGATC TTGAGATGGC TTCGACGAAA GCAGACAAGA TGGATGAGAA TCTGTCATCT TTCTTAGAAG AAGCAGAGTA TGTGAAAGCA GAGATGGGTC TGATTAGTGA GACACTGGCT CGGATTGAGC AGTACAACGA AGAGAGTAAA GGTGTGCACA AGGCAGAGTC TGTGAAGTCT CTTCGTAACA AGATCTCTAA TGAGATTGTG TCTGGTCTGA GGAAAGCAAA ATCGATAAAG TCGAAGCTGG AAGAGATGGA TAAAGCCAAC AAGGAGATTA AGAGGCTCTC TGGGACTCCG GTTTACAGGA GCAGAACCGC TGTGACTAAC GGGCTGAGGA AGAAGTTGAA GGAAGTGATG ATGGAGTTTC AAGGGCTGAG GCAAAAGATG ATGACTGAGT ACAAGGACGC TGTTGAGAGA AGGTACTTCA CTGTGACTGG AGAACATCCT GATGAAGCGA TGATTGAGAA GATCATCACT GATAACGCTG GAGGTGAAGA GTTTCTCACG CGAGCAATCC AGGAACATGG TAAAGGAAAA ATCTTGGAAA CTGTGGTTGA GATTCAAGAT AGGTATGATG CAGCCAAGGA GATTGAGAAG AGTCTGTTGG AGCTTCACCA AGTGTTTCTT GATATGGCTG TGATGGTTGA ATCGCAAGGT GAACAGATGG ATGAGATTGA GCATCATGTG ATAAATGCGA GCCATTACGT GGCGGATGGG GCTAATGAGC TGAAGACTGC AAAGAGTCAT CAGAGAAACA GCAGGAAATG GATGTGCATT GGTATCATTG TGTTGCTTTT GATCATTCTC ATTGTTGTCA TCCCCATCAT AACCAGTTTC AGCTCTTCTT GAGATGCTTA CTATGTTCAC TCCTTGTGGT TTGTTT 
Length976
Protein Sequence
Protein Residue
Map Locationscaffold_1: 3063376.. 3064351
Download Sequence
A.thaliana
AGI-codeAT1G08560.1
Descriptionsyntaxin of plants 111
TAIR curator summarymember of SYP11 syntaxin Gene Family
Alias[ATSYP111][KN][SYP111][KNOLLE][syntaxin of plants 111]
Gene coexpression
MR
MR Locus Description
5.47723 Ahg481360 early nodulin-like protein 14
5.74456 Ahg350051 glucan endo-1,3-beta-glucosidase-like protein 3
6.40312 Ahg472662 MLP-like protein 423
6.48074 Ahg488576
7.34847 Ahg489947 HMG (high mobility group) box protein
7.61577 Ahg477690 Li-tolerant lipase 1
7.74597 Ahg920750 Pathogenesis-related thaumatin superfamily protein
8.12404 Ahg470351 targeting protein for XKLP2
8.3666 Ahg479423 phragmoplast orienting kinesin 2
9.59166 Ahg903003
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression