Detail



ID : Ahg471082

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|471082|fgenesh2_kg.1__1036__AT1G09800.1
Sequence
ACATTGGCAC TGAGCTTGAG ACGGTGAGAA ATCATAAATC TGTGTGAGTG ATAATGTCCG ATAATCTGAA GCATCCTCTC GATTCTACAG CTAGTGAGGA ATCACTCGAG AGACTCTCAA AGGTTGCGAG AATCGAGGGA TTTAGTGACG AAGAAGAAGC AGAGGAACAA CAAGGATTGG GCGACTCGGA GTCCATGAAC CCAGTAAACC CTAGGGTGCA GCGTTACTTG GTTGCCATTG AGTACATCGG AACTCGTTTC TCCGGTTCAC AACAGCAAGC TAAGGACCGC ACCGTCGTCG GTGTATTGCA GGAGGCTTTT CATAAGTTTA TTGGCCAACC AGTGAAGATC TTCTGCTCAA GTCGAACGGA TGCCGGAGTG CATGCACTGT CAAATGTTTG CCATGTTGAT GTGGAACGCA TCAGTAAAAG GAAGCCTGGT GAAGTGTTAC CACCTCATGA GCCTGGTGTG GTCCAGAGAG CTGTGAACCA TTTTTTACAG AGAAAAGATG GCGATGTTAT GGTGATTGAT GTTCGGTGTG TCCCAAGTAA TTATCATGCC AGATATAAGG CCCAGGAGCG CACATACTTC TACCGCTTGC TATCGGGGTC AGATCCATTA TCAATCCTTG AAAAAGACCG TTGCTGGCAT GTTCCTGAGG AGCTAAATCC TCGCTCTATG CAGGAAGCAT GCAGAGTTCT TGTTGGATCT CATGATTTTA GCTCCTTCAG GGCAGCTGGT TGCCAGGCAA AGTCACCTAT GAGATCTTTA GATGAACTCA ATATTACTGA AGTACCATCA ACTCCATATT TTCCATCTAT CACGGAAAGG GCGTGGAGTA ACCAAAACAA TGGAGATCCT CTCGCATGTT CCAGTCAACC CAAGTCTGAG ACTGCTGGTG TTACTACTAA TGTTGGAGAA GTGGAGGGGT CTACAGATGG TGATTCTTTT GGTAGAAGGA GACGGCACCG CTGCTATGTA GTTACAACGC GTTCCCGGGG TTTTCTGTAC CACCAGGTTC GACTGATTGT AGGAGCACTG AAATGCGTAG GCACTGGAGA ATTGACGGTC TCAGACGTTG AACGAATCCT GGAGGCGAAG ACAGTGAGTG CAGCCAAACC CATGGCTCCT GCATCTGGTC TGTATCTTGC CCGTGTCAAA TATGAGTTTC CATGAAGATT TAAGCTCACT TCATTTCCGC TACAGTGGGT GAGGAGTTAC CAAAATTGGT TTTTGTTCAG AAGCTGAATA GAGAGAGATA CTGAGTTCAT AT 
Length1272
Protein Sequence
Protein Residue
Map Locationscaffold_1: 3556254.. 3559571
Download Sequence
A.thaliana
AGI-codeAT1G09800.1
DescriptionPseudouridine synthase family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
4.69042 Ahg478912
5.09902 Ahg312397 Plant protein of unknown function (DUF863)
8.83176 Ahg475310 RNA-binding (RRM/RBD/RNP motifs) family protein
10.4881 Ahg911600 Rhodanese/Cell cycle control phosphatase superfamily protein
11.4891 Ahg933732 Thioredoxin superfamily protein
13.1909 Ahg493336 tRNA/rRNA methyltransferase (SpoU) family protein
14.3875 Ahg494424 protein dimerizations
14.6629 Ahg940565 Tudor/PWWP/MBT superfamily protein
15.4919 Ahg345344 Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein
15.8745 Ahg336962 D-cysteine desulfhydrase
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression